Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1033248 98.7 2e-15 seq347881 86.0 1e-11 >seq1033248 Length=572 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/228 (71%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| |||||| || || || |||||||| ||||| || ||||| || || ||||||| Sbjct 359 TTTATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAA 300 Query 61144 GGACTCCGTTTTATCCTCGTAGCCCGTATG-GTGTTGCAAAACTATACGCTTACTGGAT- 61201 ||||| ||||| || || || || | |||| || || || ||||| || ||||| Sbjct 299 CTACTCCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATA 241 Query 61202 -TTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATC 61260 | || || ||||| ||| | || | ||||| | ||||||| || ||||||| Sbjct 240 GTCGTTAAC--TACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATC 183 Query 61261 ACGAGAGTCCCAATAGAGGTCATCAGTTT-GTGACTCGTAAAATTACG 61307 |||| ||||| | |||||| | ||||| |||||||| || || ||| Sbjct 182 ACGAAAGTCCGAGAAGAGGTGA-GAGTTTCGTGACTCGGAAGATCACG 136 >seq347881 Length=262 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||| | ||||||||||||||||||| | ||||| ||||||| | |||||||||||| ||| Sbjct 257 GCCTGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCAAGC 198 Query 165770 CCCACGATGGGC 165781 |||||| |||| Sbjct 197 CCCACGTCGGGC 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1041312295269990