Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq943454 140 2e-28 seq521853 127 1e-24 seq498209 91.5 1e-13 >seq943454 Length=587 Score = 140 bits (154), Expect = 2e-28 Identities = 206/292 (71%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 101529 TTTCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAA 101588 ||| ||| |||||||||| |||| |||| | || || || || || ||||| | Sbjct 293 TTTATTACACAGCCATATCCATTGTAATCTTTCCATGAGGTTTGTAATTGTCTAACTGGA 234 Query 101589 TGTCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAA 101648 ||||||| |||| ||||| ||| | ||| | || ||| | | | | |||||| | Sbjct 233 AGTCATCTACTTTGAAGTCGGTAATATCTTTAACGTCTCGAGCGATTTTCAATGTTGGGA 174 Query 101649 ACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGT 101708 | || | |||||||| | || ||| | | || ||||||| ||||| | || Sbjct 173 ATGGCCGTGGAGTTCGATCGAGTTGTTCTTTCAACGGCTCTATGTGATTGACATACACGT 114 Query 101709 GAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCA 101768 || ||| |||| || || |||||||||||||| |||| ||| || | ||||||| Sbjct 113 GACTATCACCTAACGTGTGAATAAACTCTCCAGGTTCTAGGCCAGTTACTTTGGCAATCA 54 Query 101769 TGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCAT 101820 |||| || | ||||||||| || |||||||| ||||| |||||||| ||||| Sbjct 53 TGCACGTGAGAAGAGAATAACTGGCAATGTTGAATGGAACTCCTAATCCCAT 2 >seq521853 Length=341 Score = 127 bits (140), Expect = 1e-24 Identities = 201/288 (70%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| |||||||||| |||| ||| | || || || || || ||||| | ||| Sbjct 289 TTACACAGCCATATCCATTGCAATCTTTCCATGAGGTTTGTAATTGTCTAACTGGAAGTC 230 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 ||| |||| ||||| ||| | ||||| || ||| | | | | |||||| || || Sbjct 229 CTCTACTTTGAAGTCGGTAATATCTTTAACATCTCGAGCGATTTTCAATGTTGGGAATGG 170 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 | |||||||| | || ||| | | || | ||||| ||||| | |||| Sbjct 169 ACGTGGAGTTCGATCGAGTTGTTCTTTCAACGGCTCTACGTGATTGACATACACGTGACT 110 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCA 101772 ||| |||| || || |||||||||||||| |||| ||| || | ||||||||||| Sbjct 109 ATCACCTAACGTGTGAATAAACTCTCCAGGTTCTAGGCCAGTTACTTTTGCAATCATGCA 50 Query 101773 AGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCAT 101820 || | ||||||||| || |||||||| ||||| |||||||| ||||| Sbjct 49 CGTGAGAAGAGAATAACTGGCAATGTTGAATGGAACTCCTAATCCCAT 2 >seq498209 Length=238 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/229 (72%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 101867 ACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 || ||||| || ||| || | ||||||||| ||||| ||||||||||||||||| | Sbjct 7 ACGTAAAACTGGACTAAACA-ATGACAAGGTGGCAAAACCATTTTAGGAATGTCAACAGG 65 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGT-TTTTATAGTATCAATCA 101984 |||||| |||||||| | || | || ||| || ||| | | ||||| ||| | || | Sbjct 66 ATTCCAGGCACACATGATGATACGTCGATC-GTCGGGCCTATCTTTTAGAGTTTTGATAA 124 Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC-GCGCCCAACAC-CTTTATATTC 102042 | | ||||| |||| ||||| ||| | || || ||| || | || || | | Sbjct 125 CTTCCTGCAATTGATCAATTCCTTGACCTGTGTAGTCTGCGTTCATTTCACTGTA-AGGC 183 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCT 102091 || || || || | ||| ||||| |||||||||||||| ||||| ||| Sbjct 184 -GCACCAAAGTGGCGCCATTGAAAACCATACACAGGTCCCAGATCACCT 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355887449767523