Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1197690 167 3e-36 seq1211838 123 3e-23 seq1055522 118 1e-21 seq1170154 87.8 2e-12 seq277695 87.8 2e-12 >seq1197690 Length=1171 Score = 167 bits (184), Expect = 3e-36 Identities = 457/693 (66%), Gaps = 8/693 (1%) Strand=Plus/Plus Query 54353 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 54412 ||||| || || || ||||| || || || |||| | ||| || |||||||| | Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351 Query 54413 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 54472 || | | ||| | ||| | || | ||| || ||||| || || || || || Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411 Query 54473 GAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 54532 || | |||| ||| ||||| ||||| || || || || | || || ||||| ||| Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471 Query 54533 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAG 54592 |||||||| | ||||||||| || | ||| |||| || | | || |||||||| Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGACTTTCTGATCAATGCGAAGCAAGTAC 531 Query 54593 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAA 54650 || |||| |||||||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 532 GAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATTA 589 Query 54651 TAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT-AATACTTGAAATA 54709 || | || || ||| ||| || || || ||| | | |||| || | ||| || Sbjct 590 TAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGATC 648 Query 54710 ATCGGAGAATGTTTC-CCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTC 54768 || || | | || | ||| | | | |||| ||| ||||| | ||| || || Sbjct 649 ATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACATC 707 Query 54769 ACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAAT 54828 ||| || ||| ||||| || ||||| | ||||| || || || | || || || || Sbjct 708 ACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGAT 767 Query 54829 GGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAA 54888 |||||||| || |||| || || ||||| || ||||||||| || | | || | Sbjct 768 AGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAAG 827 Query 54889 TTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGG 54948 || || ||||| || ||| ||| | || | ||| |||||||| | |||| | || Sbjct 828 CTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCGG 887 Query 54949 ATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTATC 55008 || | | ||| |||| | ||||| || | |||| ||| ||||| || || || || Sbjct 888 TTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGTC 947 Query 55009 AAACATGACATTTTCCTTGTATCCATTTCGTTT 55041 || ||| | ||| || ||||| ||||| Sbjct 948 GAAATGGACCTCTTCTTTACGTCCATCGCGTTT 980 >seq1211838 Length=1880 Score = 123 bits (136), Expect = 3e-23 Identities = 214/311 (69%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 24405 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 24464 || ||||| ||||| ||||| ||||| || ||||| | || || || || || || || Sbjct 396 TACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAA 337 Query 24465 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTT 24524 ||||||||||| | ||||| || ||||| ||||| | || ||||| | | ||| Sbjct 336 CCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTC 277 Query 24525 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 24584 || || || |||||||| || ||||| || ||||| || || || |||| | Sbjct 276 TCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTC 217 Query 24585 TCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 24644 || | | | || | ||| | | || || || |||| || || ||||| || Sbjct 216 TCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCT 157 Query 24645 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 24704 ||||| ||||| || |||||||| || ||||| |||||||||||| || || || || Sbjct 156 GTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGG 97 Query 24705 AAAATAACAAA 24715 || || || || Sbjct 96 AAGATCACGAA 86 >seq1055522 Length=411 Score = 118 bits (130), Expect = 1e-21 Identities = 215/312 (69%), Gaps = 2/312 (1%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || ||||| || | ||||||||||| ||| || || | || || || | ||| Sbjct 25 CCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCGCTCCATG 84 Query 54041 AAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCC 54099 || || || |||||||| || || || || || || |||| || | |||||| || || Sbjct 85 AACAGGTCGGGAATCCAGAGGGCGTAGAACAAG-TCCCTGGCTCGAACTTCCTCCTTGCC 143 Query 54100 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 54159 || || || || ||||||||||| | | | || | ||||| ||||||| || || Sbjct 144 CGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGAT 203 Query 54160 GGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 54219 | | | || || || ||||| || || || || | ||| | || ||||| || || Sbjct 204 TGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTGTA 263 Query 54220 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 54279 || | |||||| |||| ||||| |||||| || ||||| |||| ||| ||||| || Sbjct 264 GACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTAGCTACC 323 Query 54280 ACTGGCACGAAT 54291 ||||||| || Sbjct 324 CTTGGCACGGAT 335 >seq1170154 Length=949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 23949 CCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAA 24008 |||| || |||| | |||||||||||| ||||| || || | ||||| | | ||| Sbjct 727 CCCAGCTCGGAAAGAAGTCTATCTGCGACGAACTCGATGTACTGTCGCATCAGTACGCAA 668 Query 24009 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 24068 ||||| || || || ||| ||||| || |||| || || ||||| ||||| || Sbjct 667 TTCATGCCGATGAGGGCAACAGGAAGGGCATCAGTTAGGAACTCTTGCTCAATTTTTACA 608 Query 24069 GCGTCTGTTATAATAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 24127 || || | |||||| |||| || || ||| ||||| | | ||| || || || Sbjct 607 GCATCAATAATAATA-TTCTTGACCTCGTCCTCAGTCGGTTTCTGTACTAAGTGCTTGAA 549 Query 24128 CATCAAACATGCGAAATCGCAGTGTAGACCCT 24159 ||||| || || || |||||||| ||||||| Sbjct 548 CATCAGGCACGCAAAGTCGCAGTGAAGACCCT 517 >seq277695 Length=258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 52835 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCAT 52893 || ||||| || || ||||| ||||| || | ||| |||| ||| || |||| ||||| Sbjct 255 TTGGTACGGAGGTAATACATCCCCGTCTTCAATCCG-GACTGCCACGCGAAAAAGTGCAT 197 Query 52894 ACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATC 52953 || ||||| || | || | || || ||||| || | ||||| || || || Sbjct 196 CGAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTC 137 Query 52954 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCA 53010 |||||| ||||||||||| || ||||| || ||||| ||||| || | || ||||| Sbjct 136 GATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584680162565040