Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1211838 244 1e-59
seq1170154 125 7e-24
seq985049 120 3e-22
seq1215880 87.8 2e-12
>seq1211838
Length=1880
Score = 244 bits (270), Expect = 1e-59
Identities = 246/320 (77%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
|| || || || ||||| || |||||||| |||||||| ||||| || || |||| |||
Sbjct 56 GAACCTCTCCTCCGCGAAAATCCCCGCCGCTTCGTGATCTTCCCTATCCAGTACCATGAC 115
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||| || || || |||||||| | || ||||| |||||
Sbjct 116 ATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGGACAGCAGAAGAGGTCGACCTA 175
Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755
|||||||||| | |||||||| | | || || ||| | ||||||||| ||||
Sbjct 176 TCCAAGGACATGGCTCACTGGGAGGCCCTCAAAGATGGAGAGAGGCATTTCATCTCGCAC 235
Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815
||| ||||||| || ||||| ||||| ||||||||||||||||| || || || |||
Sbjct 236 GTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTCAACGAGAATCTCGTGGAACGGTTC 295
Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875
||||| |||||| | | ||||||||||| |||||||| || ||||| || ||||||
Sbjct 296 AGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTACGGTTTCCAGATTGCTATGGAG 355
Query 116876 AACGTGCACTCGGAAATGTA 116895
|| ||||| || || |||||
Sbjct 356 AATGTGCATTCCGAGATGTA 375
>seq1170154
Length=949
Score = 125 bits (138), Expect = 7e-24
Identities = 142/187 (76%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 116983 GAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCA-GAGAG-GCCGCCTTCGGCGAGCGC 117040
||||||||| ||||| || | |||||| | || ||||| || |||| |||||| |
Sbjct 1 GAAGGCCGACTGGGCTCTTCAGTGGATCT--GTCACGAGAGTGCATCCTTTGGCGAGAGA 58
Query 117041 CTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTT 117100
| | || || || || |||||||| ||||||| || || ||||| |||||||| ||
Sbjct 59 ATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGTTTTGCCGCCATTTTC 118
Query 117101 TGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGG 117160
||| | |||||||| || |||||||| ||||| || |||||||||||| | ||||| |
Sbjct 119 TGGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAGTTGATCTCTCGA 178
Query 117161 GACGAGG 117167
|| ||||
Sbjct 179 GATGAGG 185
>seq985049
Length=630
Score = 120 bits (132), Expect = 3e-22
Identities = 143/194 (74%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| ||||| |||||||| |||||||| ||| | || || |||||
Sbjct 575 AAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCT 516
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||| | | | | |||||| || || | ||||||||||||||||| | |||
Sbjct 515 TCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 456
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || | |||| ||| || || ||| |||| || | || ||| | |||||||
Sbjct 455 CAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTAC 396
Query 40867 AACATCCAGAAGGA 40880
|||||||| |||||
Sbjct 395 AACATCCAAAAGGA 382
>seq1215880
Length=2596
Score = 87.8 bits (96), Expect = 2e-12
Identities = 169/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 22776 GGAGGGGGTCGTGCTCAAAGGCCGGCTTTCGT-CGTACGCGCCCAACAAGAGAGACTGGT 22834
|||||| |||||||||| || || || |||||| ||| ||| || |||||
Sbjct 1994 GGAGGGACTCGTGCTCAA-GGACGCGAAGAGTACGTACGAGCCGGGGAAGCGACACTGGC 2052
Query 22835 TCAAGATGAAGAAAGAGCACCTGTGCGACGGCGCGCTGGTCGACACCCTGGACCTGGTGG 22894
||||||| ||||| || |||||| | || ||| ||| |||| | ||||||||||||
Sbjct 2053 TCAAGATCAAGAAGGACTACCTGTTTGGGGGTGCGATGGCGGACAGCGTGGACCTGGTGG 2112
Query 22895 TGCTCGGCGCCTATTACGGCACGGGCCGCAACTGTCGCAAGATGTCAGTTTTTCTGATGG 22954
| || || || | ||||||||||| ||| | ||| |||||| || || ||||
Sbjct 2113 TACTGGGGGCATGGTACGGCACGGGGGCCAAGGGGGGCATGATGTCCTCGTTCCTCATGG 2172
Query 22955 GCTGTCTGGACCGCGAGTCGAACGTGTGGACGACGGTCACCAAGGTGCACTCGGGCCTCG 23014
|| | ||| | || || |||| ||||| |||||||| ||| |||| |
Sbjct 2173 GCGTGCGCGACGGTGATAGCGACAGGTGGCGCACGGTGACCAAGGTTCACGGCGGCCATG 2232
Query 23015 CCGACGC 23021
||||||
Sbjct 2233 ACGACGC 2239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507373229494480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |