Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1022836 95.1 1e-14 seq93152 91.5 2e-13 seq470806 87.8 2e-12 seq8979 87.8 2e-12 seq5047 87.8 2e-12 seq985049 86.0 7e-12 seq734800 86.0 7e-12 seq320041 86.0 7e-12 >seq1022836 Length=672 Score = 95.1 bits (104), Expect = 1e-14 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 60077 GGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGG 60136 |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 1 GGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGG 60 Query 60137 AT 60138 || Sbjct 61 AT 62 >seq93152 Length=217 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 60080 ATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATT 60139 ||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| | Sbjct 217 ATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGACT 158 Query 60140 G-AATATATAAC 60150 | ||||| ||| Sbjct 157 GTGATATAGAAC 146 >seq470806 Length=322 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 60081 TCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 1 TCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGACTG 60 Query 60141 A 60141 | Sbjct 61 A 61 >seq8979 Length=201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 60081 TCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 60140 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct 1 TCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGACTG 60 Query 60141 A 60141 | Sbjct 61 A 61 >seq5047 Length=200 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 60082 CGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATTGA 60141 ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||| Sbjct 200 CGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGACTGA 141 Query 60142 A 60142 | Sbjct 140 A 140 >seq985049 Length=630 Score = 86.0 bits (94), Expect = 7e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | ||| |||||||| || ||||| || | || || || | Sbjct 357 ACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCC 416 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||||||||| || | ||||| ||||| | || | || ||| || Sbjct 417 ATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTT 476 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| || | | || ||| | ||| || || | || || Sbjct 477 GTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAAT 536 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 |||||| ||||| || || || || || || |||||||| || Sbjct 537 GGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTAAC 578 >seq734800 Length=436 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 60081 TCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 60137 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1 TCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTACCGAGGA 57 >seq320041 Length=271 Score = 86.0 bits (94), Expect = 7e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 60076 GGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACC 60132 ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||| Sbjct 271 GGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTACC 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563109725712440