Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq943454 91.5 1e-13 seq521853 87.8 1e-12 seq498209 82.4 6e-11 >seq943454 Length=587 Score = 91.5 bits (100), Expect = 1e-13 Identities = 196/293 (67%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547 |||||| | || ||||| ||||| ||||| |||||| | || || |||| |||||||| Sbjct 2 ATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGCC 61 Query 20548 CATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTAC 20607 | || || | || || | || || || | ||||| |||| || || | || Sbjct 62 AAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTAT 121 Query 20608 CTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACT 20667 | ||||| ||||| || || ||| ||| | ||| ||| | ||||||||| Sbjct 122 GTCAATCACATAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGGCCATTCCCAACA 181 Query 20668 CTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTA 20727 | || ||||| ||||||||||||| ||| || |||| ||||| || |||| Sbjct 182 TTGAAAATCGCTCGAGACGTTAAAGATATTACCGACTTCAAAGTAGATGACTTCCAGTTA 241 Query 20728 GAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 || ||| || || ||| ||| ||||||| ||| |||| ||||| || Sbjct 242 GACAATTACAAACCTCATGGAAAGATTACAATGGATATGGCTGTGTAATAAAT 294 >seq521853 Length=341 Score = 87.8 bits (96), Expect = 1e-12 Identities = 192/288 (67%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 20488 ATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCA 20547 |||||| | || ||||| ||||| ||||| |||||| | || || |||| ||||||||| Sbjct 2 ATGGGATTAGGAGTTCCATTCAACATTGCCAGTTATTCTCTTCTCACGTGCATGATTGCA 61 Query 20548 CATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTAC 20607 | || || | || || | || || || | ||||| |||| || || | || Sbjct 62 AAAGTAACTGGCCTAGAACCTGGAGAGTTTATTCACACGTTAGGTGATAGTCACGTGTAT 121 Query 20608 CTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACT 20667 | ||||| |||| || || ||| ||| | ||| ||| | ||||||||| Sbjct 122 GTCAATCACGTAGAGCCGTTGAAAGAACAACTCGATCGAACTCCACGTCCATTCCCAACA 181 Query 20668 CTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTA 20727 | || ||||| |||||||||||||| ||| || |||| || || || |||| Sbjct 182 TTGAAAATCGCTCGAGATGTTAAAGATATTACCGACTTCAAAGTAGAGGACTTCCAGTTA 241 Query 20728 GAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAA 20775 || ||| || || ||| ||| ||||||| ||| |||| ||| Sbjct 242 GACAATTACAAACCTCATGGAAAGATTGCAATGGATATGGCTGTGTAA 289 >seq498209 Length=238 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||| |||| ||||||||||| ||||||||| | || ||||| || || ||| Sbjct 230 GGTGATCTGGGACCTGTGTATGGTTTTCAATGGCGCCACTTTGGTGCGCCTTACAGTGAA 171 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 |||||| || | || || |||||| | |||||||| || | ||||| || | Sbjct 170 ATGAACGCAGACTACACAGGTCAAGGAATTGATCAATTGCAGGAAGTTATCAAAACTCTA 111 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||| | || |||| || | || || | || |||||||| || || | ||| Sbjct 110 AAAGATAGGCCCGACGATCGACGTATCATCATGTGTGCCTGGAATCCTGTTGACATTCCT 51 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 ||||| |||||| || |||||| || ||| ||||||||||| || Sbjct 50 AAAATGGTTTTGCCACCTTGTCATTGTTTAGTCCAGTTTTACGTTGCCAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393257034849985