Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1002630 226 2e-54 seq1055522 176 4e-39 seq1211838 172 5e-38 seq1197690 154 1e-32 seq277695 111 1e-19 seq1170154 107 2e-18 seq985049 100 2e-16 seq261775 93.3 4e-14 >seq1002630 Length=654 Score = 226 bits (250), Expect = 2e-54 Identities = 435/643 (68%), Gaps = 7/643 (1%) Strand=Plus/Plus Query 22484 CGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGA 22543 ||||| ||| |||||||| ||| |||||||||| ||||| || || || || |||||| Sbjct 3 CGGCGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGA 62 Query 22544 GCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAA 22603 ||||| ||||| || ||||| || || | || || || || | | |||||||| || Sbjct 63 GCGGTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCG 122 Query 22604 ATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATA 22663 || ||| |||||| | ||| ||||| |||| || || || || || |||||| Sbjct 123 ATCTTAGCCTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTAC---GTTCCACATG 179 Query 22664 TCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATAT 22723 ||||| || | | || || |||| | ||||||||||| ||| || || | | Sbjct 180 TCGTACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCT 239 Query 22724 ATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTC 22783 || |||| |||||||||||||| ||||| ||||||||||| || || || ||||| | Sbjct 240 TTCTCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGG 299 Query 22784 TTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCC 22843 ||| | || || | |||| ||| |||| |||||||| | ||| ||| Sbjct 300 ACGTTGAGTTTCTGAGCTTCTTCGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCC 359 Query 22844 GCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCG 22903 || | |||||| | ||| |||||||| ||||| | || ||||| || |||||| Sbjct 360 GCGAGACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTTCGCCTCG 419 Query 22904 GGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTT 22963 || | || || | || ||||| || | || | |||| | || || | ||||| Sbjct 420 GGAATCGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTTTTCGTGACGGTCTTCGTG 479 Query 22964 ATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATT--GTACAACAAACTTGTTGACGG 23021 | || || ||| |||| | || || | || ||||||||| Sbjct 480 ACCTCCTTGAGCTTCTCGAAATCG--AACGTCTTGTTCGGTTTGATGTACATGTTGACGG 537 Query 23022 CGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGG 23081 |||||||||| || ||||| ||||||||||| || || ||| |||| ||||| || | Sbjct 538 CGATCGAGGCGAGGTTGCAAACGGCCACCTCTTCCGGCGAAGTGAACTCGACAATCTCCG 597 Query 23082 TACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTT 23124 | || || ||||| || |||||||| | ||| |||||| Sbjct 598 TGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTT 640 >seq1055522 Length=411 Score = 176 bits (194), Expect = 4e-39 Identities = 211/284 (74%), Gaps = 2/284 (1%) Strand=Plus/Plus Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAG-TCATTT 23341 |||||||||| || ||||| | | ||||||||| |||||||| || || | || Sbjct 11 AACAGTCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCA-ATCCAGGTTCTTC 69 Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 || ||||| ||| || || || || ||||| || |||||||||| || | ||| || Sbjct 70 TCGACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGA 129 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| ||||| ||||| || || | ||| | || || || |||||||| ||||| Sbjct 130 ACTTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAG 189 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 || || || || | || |||||||| || | ||| |||||||| || ||||||||||| Sbjct 190 GGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGT 249 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || ||||||||||| || | | ||| || || | ||||||||| Sbjct 250 GCTGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGA 293 >seq1211838 Length=1880 Score = 172 bits (190), Expect = 5e-38 Identities = 239/335 (71%), Gaps = 0/335 (0%) Strand=Plus/Plus Query 57525 GAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTAC 57584 || |||||||| | || || || || || || | || | ||||| ||| |||||| Sbjct 71 GAAAATCCCCGCCGCTTCGTGATCTTCCCTATCCAGTACCATGACATCTGGCTGATGTAC 130 Query 57585 AAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGC 57644 || ||||||||||| || || ||||| | ||||| || ||||| || ||||| || Sbjct 131 AAGAAGGCAGAAGCCTCATTCTGGACAGCAGAAGAGGTCGACCTATCCAAGGACATGGCT 190 Query 57645 GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTC 57704 | ||||| |||||||||| ||||| |||| || ||||||||||| || || Sbjct 191 CACTGGGAGGCCCTCAAAGATGGAGAGAGGCATTTCATCTCGCACGTGTTGGCCTTCTTT 250 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764 |||||||| || || || || ||||||||| | || ||| | || || |||||||| Sbjct 251 GCCGCATCGGACGGAATCGTCAACGAGAATCTCGTGGAACGGTTCAGCCAGGAAGTGCAG 310 Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824 | ||||||||| | || || ||||| || || | || || || || |||||||| || Sbjct 311 ATAACGGAGGCGCGGTGTTTCTACGGTTTCCAGATTGCTATGGAGAATGTGCATTCCGAG 370 Query 57825 ATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 ||||| || | || ||||||||| | ||||| Sbjct 371 ATGTACAGTCTGTTGATAGATACGTACATCAAGGA 405 >seq1197690 Length=1171 Score = 154 bits (170), Expect = 1e-32 Identities = 480/731 (66%), Gaps = 24/731 (3%) Strand=Plus/Plus Query 23633 CCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTG 23692 ||| | ||||| || | || || || || ||||| ||||| || || || |||||| Sbjct 256 CCGGCAGATTTGGAGACCAGAGCACACTGACGTAGAGTATCGTAAATCCCTTCTATGCTG 315 Query 23693 TCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAG 23752 || ||| | || | | ||| || ||| | || | | | || ||||| || | Sbjct 316 TCGTCTGACATGGCCAATAGGAAGCAGCTAGATAACTGAGGTCTTGGAGTAGCAGCACTG 375 Query 23753 AACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATG 23812 || || |||||| || || || ||||||| | ||||| |||| ||| || || || Sbjct 376 AAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCCGACAAAAGATCGTAGGTCTCAATA 435 Query 23813 GCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGT 23872 |||| ||||||||| |||||||| || || | ||||| ||||||| ||||| || || Sbjct 436 GCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCGACACGCATCAGCATGTGCTGCGGA 495 Query 23873 CTCTCGACCGTGACG--CCGTTAATTTTGAA-CAGATATGAACGTTGCATCGTTTTAAAT 23929 | ||||| ||| | | | | | ||| || || ||||| | || |||||||||| Sbjct 496 CGTTCGAC---GACTTTCTGATCAATGCGAAGCAAGTACGAACGCTCCAGCGTTTTAAAT 552 Query 23930 CCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCA 23989 ||||| || | ||| | || || ||||||| | ||| || ||||| | || | ||| Sbjct 553 CCAAAGTAATTGTAGCTGAAATCTCGATCGTAGATTATAGCGGAATTAAGTCGATCAGCA 612 Query 23990 TTGGCAGCGATGATGTTGTAATGAAAATTCGATATCATCGGCGTTTTAACGC----CG-G 24044 || | || | | | ||||||| || ||||| || | || | | || Sbjct 613 TTCTTTGAAATTACTTGCTGGTGAAAATCTGAGATCATTGGGG---TAGCCCTCTTCGTT 669 Query 24045 TCTTTG-GATCGATCGCTTCATACATATCGATAATGACATCGAAAAAAGAATCTTTAGTC 24103 |||||| || ||| | || || ||| || ||||| ||||| | || ||| Sbjct 670 TCTTTGTTATACATC---TTATGCAAATCTTCCATAACATCACTGAAAGATTTCTTTGTC 726 Query 24104 TCCTTGTGCAAATTAGACACGGCCAATCTAGCCGCAAGCAACGAATAGTCGGAATGATCG 24163 ||||||||||| || || || || | | || ||||| | | ||| || | || | Sbjct 727 TCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGATAGCATAATCAGGGTGTTTA 786 Query 24164 ATGGTCATGGCCGCTGCCGTCTCGGCGATTAGATTGTCCAATTCAGCGGTGGTCACGCCC 24223 ||||||| | || ||||| ||||| | ||| || | || | || || ||||| Sbjct 787 GTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAAGCTCGACAGTTGTAACGCCA 846 Query 24224 GAATAGATTCC-TTGATCGACGCGCACAGCTACGGATGTGGGATTTACAAAATTCATGTC 24282 | ||||| || ||||| || || | || | | || | | ||||| ||||| Sbjct 847 GGATAGAGACCGTTGAT-TACCTTCATCGTTATTGCAGCCGGTTCCAGAAAATCCATGTT 905 Query 24283 GAGTCCGTAACATAGTTTTTCAATTCGACACTTTATCTTGT--ACATGAAAACGGCTTCT 24340 ||| || || || ||||||| ||||||| | ||||||||| | ||| || ||||| Sbjct 906 GAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGTCGAAATG--GACCTCTTCT 963 Query 24341 TTCCTTCCATC 24351 || | |||||| Sbjct 964 TTACGTCCATC 974 >seq277695 Length=258 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22142 TTGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATC 22201 ||||| || || |||||||| |||||||||| || || ||||||| |||| || ||| Sbjct 255 TTGGTACGGAGGTAATACATCCCCGTCTTCAATCCGGACTGCCACGCGAAAAAGTGCATC 196 Query 22202 GACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCG 22261 || |||| ||| || || | || | | |||| | |||| ||| || ||||| ||| Sbjct 195 GAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTCG 136 Query 22262 ATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACG 22321 || |||||||| | ||||||||||| || || | || | || || ||||| ||| Sbjct 135 ATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCACACG 76 Query 22322 GTCTTGTACAG 22332 |||||||| || Sbjct 75 GTCTTGTAGAG 65 >seq1170154 Length=949 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 |||||| | || || || || || ||||| ||||| ||||| || || || ||||| || Sbjct 52 CGAGAGAATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGTTTTGCCGC 111 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| |||||||||| || || ||||| ||||| || || |||||||||||||| Sbjct 112 CATTTTCTGGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAGTTGAT 171 Query 58088 ATCGCGCGACGAGG 58101 || || || |||| Sbjct 172 CTCTCGAGATGAGG 185 >seq985049 Length=630 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| || || || || || ||||| || ||| | || || ||| | Sbjct 575 AAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCT 516 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||| | | |||| | ||||| || || ||||| || ||| | || || ||| Sbjct 515 TCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 456 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || |||||| | || |||||||| || ||||||||||| || || ||| || Sbjct 455 CAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTAC 396 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| ||||| || || || |||| || Sbjct 395 AACATCCAAAAGGAATCAACACTCCACTTGGTCCT 361 >seq261775 Length=254 Score = 93.3 bits (102), Expect = 4e-14 Identities = 174/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 || || || ||||| || |||||||| | ||| |||||| ||| |||||| Sbjct 3 GTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAC 62 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | || ||||| |||||||| ||||| || || |||||||||||||||||||| || | Sbjct 63 GCGTCTTTGTACAGCATGTATGGCGTTCCGGTTTCGACCTGCGACTCGATGATGGCGTAC 122 Query 23201 CACATAGTCTGAGC-GTGAACACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTA 23259 |||| || || ||| | | |||| || | ||||| ||||||| ||||| Sbjct 123 CACAGCTGTTGGGCTCTGACCTTCT-TCACGAACTTTCCTTCCGACTCGTAC--TTGGTG 179 Query 23260 CAACGCGTCA--AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACAC 23317 | | ||| || |||| || |||||||||| || ||||| | | ||||||| Sbjct 180 TAGAGTTTCACGAAGTCGGGTCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACAC 239 Query 23318 ATGAGACTCCA 23328 || |||||||| Sbjct 240 ATCAGACTCCA 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 438978085382160