Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq1002630 84.2 2e-11 >seq1002630 Length=654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 172/254 (68%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 37302 CCAATCCCATAAATCTGTTGGGTT--CTTTAACCACATATCATATTGTAGAATACCTTTA 37359 ||||||||| | || || ||| | | || |||||| || || |||||||| || || Sbjct 143 CCAATCCCAGAGATTGGTGGGGGTTACGTT--CCACATGTCGTACTGTAGAATCCCCTTG 200 Query 37360 CTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTA 37419 || | ||| | | | || || || || || | | | || |||||||| || Sbjct 201 CTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCGGCGAGTTCGCAGCTC 260 Query 37420 GATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCT 37479 | ||| | ||| | ||||| |||||||| || || || | || | | | | |||||| Sbjct 261 GCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTGAGTTTCTGAGCTTCT 320 Query 37480 TCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATA 37539 ||||| ||||| | ||| | || | || || | ||| || | |||||| | |||||| Sbjct 321 TCGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGACCCTGGATGCCGATA 380 Query 37540 CCTATGGGTCTATG 37553 || ||||||| ||| Sbjct 381 CCGATGGGTCGATG 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461389911079120