Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq1197690 170 2e-37
seq1211838 120 4e-22
seq1055522 120 4e-22
seq277695 87.8 2e-12
>seq1197690
Length=1171
Score = 170 bits (188), Expect = 2e-37
Identities = 460/694 (66%), Gaps = 10/694 (1%)
Strand=Plus/Plus
Query 66384 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 66443
||||| || || || ||||| || || || |||| | ||| || |||||||| |
Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351
Query 66444 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503
|| | | ||| | ||| | || | ||| || ||||| || || || || ||
Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411
Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 66563
|| | |||| ||| ||||||||||| || || || || | || || ||||| |||
Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471
Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA-CAAGTA 66622
|||||||| | ||||||||| || | ||| |||| ||| || | | | || ||||||
Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGA-CTTTCTGATCAATGCGAAGCAAGTA 530
Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATA 66680
|| |||| |||||||| ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 531 CGAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATT 588
Query 66681 ATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT-AATACTTGAAAT 66739
||| | || || ||| ||| || || || ||| | | |||| || | ||| ||
Sbjct 589 ATAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGAT 647
Query 66740 AATCGGAGAATGTTTC-CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTT 66798
|| || | | || | ||| | | | |||| || ||||| ||||| || |
Sbjct 648 CATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACAT 706
Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858
|||| || ||| ||||| || ||||| | ||||| || || || | || || | |
Sbjct 707 CACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGA 766
Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918
| |||||||| || |||| || || ||||| || |||||||||||| | | || |
Sbjct 767 TAGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAA 826
Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAG 66978
|| || ||||| || ||| ||| | || | ||| |||||||| | |||| | |
Sbjct 827 GCTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCG 886
Query 66979 GATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTAT 67038
| || | | ||| |||| | ||||| || | |||| ||| ||||| || || || |
Sbjct 887 GTTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGT 946
Query 67039 CAAACATGACATTTTCCTTGTATCCATTTCGTTT 67072
| || ||| | ||| || ||||| |||||
Sbjct 947 CGAAATGGACCTCTTCTTTACGTCCATCGCGTTT 980
>seq1211838
Length=1880
Score = 120 bits (132), Expect = 4e-22
Identities = 213/311 (68%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487
|| ||||| ||||| ||||| ||||| || ||||| | || || || || || || ||
Sbjct 396 TACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAA 337
Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547
||||||||||| | ||||| || ||||| ||||| | || ||||| | | |||
Sbjct 336 CCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTC 277
Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 36607
|| || || |||||||| || ||||| || ||||| || || || |||| |
Sbjct 276 TCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTC 217
Query 36608 TCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 36667
|| | | || | ||| | | || || || |||| || || ||||| ||
Sbjct 216 TCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCT 157
Query 36668 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 36727
||||| ||||| || |||||||| || ||||| |||||||||||| || || || ||
Sbjct 156 GTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGG 97
Query 36728 AAAATAACAAA 36738
|| || || ||
Sbjct 96 AAGATCACGAA 86
>seq1055522
Length=411
Score = 120 bits (132), Expect = 4e-22
Identities = 213/311 (68%), Gaps = 0/311 (0%)
Strand=Plus/Plus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
|| ||||| || | ||||||||||| ||| || || | || || || | |||
Sbjct 25 CCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCGCTCCATG 84
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| || || |||||||| || || || || || |||| || | |||||| || ||
Sbjct 85 AACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTCCTTGCCC 144
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
|| || || || ||||||||||| | | | || ||||| ||||||| || ||
Sbjct 145 GTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGATT 204
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | || || || ||||| || || || || | ||| | || ||||| || ||
Sbjct 205 GCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTGTAG 264
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | |||||| |||| ||||| |||||| | || ||||| |||| ||| ||||| ||
Sbjct 265 ACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTAGCTACCC 324
Query 66312 CTTGCACGAAT 66322
| ||||| ||
Sbjct 325 TTGGCACGGAT 335
>seq277695
Length=258
Score = 87.8 bits (96), Expect = 2e-12
Identities = 127/177 (72%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 64866 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCAT 64924
|| ||||| || || ||||| ||||| || | ||| |||| ||| || |||| |||||
Sbjct 255 TTGGTACGGAGGTAATACATCCCCGTCTTCAATCCG-GACTGCCACGCGAAAAAGTGCAT 197
Query 64925 ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATC 64984
|| ||||| || | || | || || ||||| || | ||||| || || ||
Sbjct 196 CGAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTC 137
Query 64985 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCA 65041
|||||| ||||||||||| || ||||| || ||||| ||||| || | || |||||
Sbjct 136 GATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCA 80
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 648149873105320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |