Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1197690 170 2e-37 seq1211838 120 4e-22 seq1055522 120 4e-22 seq277695 87.8 2e-12 >seq1197690 Length=1171 Score = 170 bits (188), Expect = 2e-37 Identities = 460/694 (66%), Gaps = 10/694 (1%) Strand=Plus/Plus Query 66384 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 66443 ||||| || || || ||||| || || || |||| | ||| || |||||||| | Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351 Query 66444 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 66503 || | | ||| | ||| | || | ||| || ||||| || || || || || Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411 Query 66504 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 66563 || | |||| ||| ||||||||||| || || || || | || || ||||| ||| Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471 Query 66564 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA-CAAGTA 66622 |||||||| | ||||||||| || | ||| |||| ||| || | | | || |||||| Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGA-CTTTCTGATCAATGCGAAGCAAGTA 530 Query 66623 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATA 66680 || |||| |||||||| ||||| || ||||| ||||| ||||| ||||| || Sbjct 531 CGAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATT 588 Query 66681 ATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT-AATACTTGAAAT 66739 ||| | || || ||| ||| || || || ||| | | |||| || | ||| || Sbjct 589 ATAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGAT 647 Query 66740 AATCGGAGAATGTTTC-CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTT 66798 || || | | || | ||| | | | |||| || ||||| ||||| || | Sbjct 648 CATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACAT 706 Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || ||| ||||| || ||||| | ||||| || || || | || || | | Sbjct 707 CACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGA 766 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | |||||||| || |||| || || ||||| || |||||||||||| | | || | Sbjct 767 TAGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAA 826 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAG 66978 || || ||||| || ||| ||| | || | ||| |||||||| | |||| | | Sbjct 827 GCTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCG 886 Query 66979 GATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTAT 67038 | || | | ||| |||| | ||||| || | |||| ||| ||||| || || || | Sbjct 887 GTTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGT 946 Query 67039 CAAACATGACATTTTCCTTGTATCCATTTCGTTT 67072 | || ||| | ||| || ||||| ||||| Sbjct 947 CGAAATGGACCTCTTCTTTACGTCCATCGCGTTT 980 >seq1211838 Length=1880 Score = 120 bits (132), Expect = 4e-22 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 36428 TATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAAT 36487 || ||||| ||||| ||||| ||||| || ||||| | || || || || || || || Sbjct 396 TACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAA 337 Query 36488 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTT 36547 ||||||||||| | ||||| || ||||| ||||| | || ||||| | | ||| Sbjct 336 CCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTC 277 Query 36548 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 36607 || || || |||||||| || ||||| || ||||| || || || |||| | Sbjct 276 TCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTC 217 Query 36608 TCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 36667 || | | || | ||| | | || || || |||| || || ||||| || Sbjct 216 TCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCT 157 Query 36668 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 36727 ||||| ||||| || |||||||| || ||||| |||||||||||| || || || || Sbjct 156 GTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGG 97 Query 36728 AAAATAACAAA 36738 || || || || Sbjct 96 AAGATCACGAA 86 >seq1055522 Length=411 Score = 120 bits (132), Expect = 4e-22 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 || ||||| || | ||||||||||| ||| || || | || || || | ||| Sbjct 25 CCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCGCTCCATG 84 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || || || |||||||| || || || || || |||| || | |||||| || || Sbjct 85 AACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTCCTTGCCC 144 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 || || || || ||||||||||| | | | || ||||| ||||||| || || Sbjct 145 GTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGATT 204 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | || || || ||||| || || || || | ||| | || ||||| || || Sbjct 205 GCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTGTAG 264 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | |||||| |||| ||||| |||||| | || ||||| |||| ||| ||||| || Sbjct 265 ACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTAGCTACCC 324 Query 66312 CTTGCACGAAT 66322 | ||||| || Sbjct 325 TTGGCACGGAT 335 >seq277695 Length=258 Score = 87.8 bits (96), Expect = 2e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 64866 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCAT 64924 || ||||| || || ||||| ||||| || | ||| |||| ||| || |||| ||||| Sbjct 255 TTGGTACGGAGGTAATACATCCCCGTCTTCAATCCG-GACTGCCACGCGAAAAAGTGCAT 197 Query 64925 ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATC 64984 || ||||| || | || | || || ||||| || | ||||| || || || Sbjct 196 CGAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTC 137 Query 64985 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCA 65041 |||||| ||||||||||| || ||||| || ||||| ||||| || | || ||||| Sbjct 136 GATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648149873105320