Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1197690 188 1e-42 seq1211838 141 1e-28 seq1055522 123 4e-23 >seq1197690 Length=1171 Score = 188 bits (208), Expect = 1e-42 Identities = 462/693 (67%), Gaps = 8/693 (1%) Strand=Plus/Plus Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT 80322 ||||| || || || |||||||| || || |||| | ||| || |||||||| | Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351 Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 || | | ||| | ||| | || | ||| || ||||| || || || || || Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411 Query 80383 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCG 80442 |||| |||| ||| ||||||||||| || || || || | || || ||||| ||| Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471 Query 80443 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAA 80502 |||||||| | ||||||||| || | ||| |||| || | || || | |||||| Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGACTTTCTGATCAATGCGAAGCAAGTAC 531 Query 80503 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAA 80560 || |||| |||||||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 532 GAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATTA 589 Query 80561 TAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-TGAAATA 80619 || | || || ||| ||| || || || ||| | | |||||| | | ||| || Sbjct 590 TAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGATC 648 Query 80620 ATCGGAGAATGTTTC-CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 80678 || || | | || | ||| | | | |||| || ||||| ||||| || || Sbjct 649 ATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACATC 707 Query 80679 ACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAAT 80738 ||| || ||| ||||| |||||||| | ||||| || || || | || || | || Sbjct 708 ACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGAT 767 Query 80739 GGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAA 80798 |||||||| || |||| || || ||||| || |||||||||||| | | || | Sbjct 768 AGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAAG 827 Query 80799 TTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGG 80858 || || ||||| || ||| ||| | || | ||| |||||||| | |||| | || Sbjct 828 CTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCGG 887 Query 80859 ATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATC 80918 || | | ||| |||| | ||||| || | |||| ||| ||||| || || || || Sbjct 888 TTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGTC 947 Query 80919 AAACATGACATTTTCCTTGTATCCATTTCGTTT 80951 || ||| | ||| || ||||| ||||| Sbjct 948 GAAATGGACCTCTTCTTTACGTCCATCGCGTTT 980 >seq1211838 Length=1880 Score = 141 bits (156), Expect = 1e-28 Identities = 218/311 (70%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 50230 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 50289 || ||||| ||||| ||||| ||||| || ||||| | || || || || ||||| || Sbjct 396 TACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAA 337 Query 50290 CCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTT 50349 ||||||||||| | ||||| || ||||||||||| | || ||||| | | ||| Sbjct 336 CCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTC 277 Query 50350 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTT 50409 || || || |||||||| || ||||| || ||||| || || || ||||| | Sbjct 276 TCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTC 217 Query 50410 TCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 50469 || | | || | ||| | | || || || |||| || || ||||| || Sbjct 216 TCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCT 157 Query 50470 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGG 50529 ||||| ||||| || |||||||| || ||||| |||||||||||| || ||||| ||| Sbjct 156 GTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGG 97 Query 50530 AAAATAACAAA 50540 || || || || Sbjct 96 AAGATCACGAA 86 >seq1055522 Length=411 Score = 123 bits (136), Expect = 4e-23 Identities = 230/333 (69%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 79872 TCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATC 79931 ||||||| ||| | | || ||||| |||| |||||||||| ||| | |||| Sbjct 6 TCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACACATCA--GACTCCAATCCAGG 63 Query 79932 ATCCTTT--ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCT 79988 || | | || || | ||| || || || |||||||| || || || || || || || Sbjct 64 TTCTTCTCGACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAG-TCCCT 122 Query 79989 GGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 80048 || || | ||||| || || || || || || ||||||||||| | | | || | Sbjct 123 GGCTCGAACTTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGC 182 Query 80049 ATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTAT 80108 ||||| ||||||| || || || | | || || || ||||| || || || || | Sbjct 183 GTGCCAGGGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGAC 242 Query 80109 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 80168 ||| | || ||||| || || || | |||||| |||| ||||| |||||| | || || Sbjct 243 GTAACGTGCTGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTT 302 Query 80169 GGTCCCGGAGATATAGCTTCCACTGGCACGAAT 80201 ||| |||| ||| ||||| || ||||||| || Sbjct 303 GGTGCCGGCGATGTAGCTACCCTTGGCACGGAT 335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707330706427720