Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1170154 82.4 7e-11 >seq1170154 Length=949 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||| | || | ||||| ||||| | || ||||| | ||| ||||| | Sbjct 185 CCTCATCTCGAGAGATCAACTCGTTGCTGAATGTGAGGCCAGGCATGAGTCCACGTTTCT 126 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | ||||| || || || ||||| ||||| ||||| || ||||| ||||||||||| | Sbjct 125 TCAACCAGAAAATGGCGGCAAAACTACCGGAGAAGAAGATACCCTCGACTGCAGCAAATG 66 Query 14014 CTATTAATCGTTCTCCAAACGATGC 14038 | || | || || ||||| ||||| Sbjct 65 CAATGATTCTCTCGCCAAAGGATGC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472422504128200