Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1197690 176 6e-39
seq1211838 129 8e-25
seq1055522 116 5e-21
seq277695 93.3 6e-14
>seq1197690
Length=1171
Score = 176 bits (194), Expect = 6e-39
Identities = 441/663 (67%), Gaps = 8/663 (1%)
Strand=Plus/Plus
Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405
||||| || || || ||||| || || || |||| | ||| || |||||||| |
Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
|| | | ||| | ||| | || | ||| || ||||| || || || || ||
Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525
|||| |||| ||| ||||||||||| || || || || | || || ||||| |||
Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471
Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAG 72585
|||||||| | ||| ||||| || | ||| |||| || | || || | ||||||
Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGACTTTCTGATCAATGCGAAGCAAGTAC 531
Query 72586 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAA 72643
|| |||| |||||||| ||||| || ||||| ||||| ||||| ||||| || |
Sbjct 532 GAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATTA 589
Query 72644 TAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATA 72702
|| | ||||| ||| ||| || || || || | | |||||| | | ||| ||
Sbjct 590 TAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGATC 648
Query 72703 ATCGGAGAATGTTTC-CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 72761
|| || | | || | ||| | | | |||| || ||||| ||||| || ||
Sbjct 649 ATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACATC 707
Query 72762 ACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAAT 72821
||| || ||| ||||| |||||||| | ||||| || || || | || || || ||
Sbjct 708 ACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGAT 767
Query 72822 GGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAA 72881
|||||||| || |||| || || ||||| || |||| ||||||| | | || |
Sbjct 768 AGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAAG 827
Query 72882 TTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGG 72941
|| || ||||| || ||| ||| | || | ||| |||||||| | |||| | ||
Sbjct 828 CTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCGG 887
Query 72942 ATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATC 73001
|| | | ||| |||| | ||||| || | |||| ||| ||||| || || || ||
Sbjct 888 TTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGTC 947
Query 73002 AAA 73004
||
Sbjct 948 GAA 950
>seq1211838
Length=1880
Score = 129 bits (142), Expect = 8e-25
Identities = 215/311 (69%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394
|| ||||| ||||| ||||| ||||| || ||||| | || || || || ||||| ||
Sbjct 396 TACGTATCTATCAACAGACTGTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAA 337
Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTT 42454
||||||||||| | ||||| || | ||| ||||| | || ||||| | | |||
Sbjct 336 CCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTC 277
Query 42455 TCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 42514
||||| || |||||||| || ||||| || ||||| || || || |||| |
Sbjct 276 TCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTC 217
Query 42515 TCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACC 42574
|| | | | | | ||| | | || || || |||| || || |||||| |
Sbjct 216 TCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCT 157
Query 42575 GTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGG 42634
||||| ||||| ||||||||||| || ||||| |||||| ||||| || || || |||
Sbjct 156 GTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGG 97
Query 42635 AAAATAACaaa 42645
|| || || ||
Sbjct 96 AAGATCACGAA 86
>seq1055522
Length=411
Score = 116 bits (128), Expect = 5e-21
Identities = 217/314 (69%), Gaps = 6/314 (2%)
Strand=Plus/Plus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTT--ACTCGTTTCA 72031
|| ||||| || | ||||||||||| ||| | |||| || | | || || | ||
Sbjct 25 CCGGGACAATCGTGCGGACACATCA--GACTCCAATCCAGGTTCTTCTCGACGCGCTCCA 82
Query 72032 TAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 72090
| || || || |||||||| || || || || || || |||| || | ||||| ||
Sbjct 83 TGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAG-TCCCTGGCTCGAACTTCCTCCTTG 141
Query 72091 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 72150
|| || || || || ||||||||||| | | | || | ||||| ||||||| ||
Sbjct 142 CCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAG 201
Query 72151 ATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 72210
|| || | | || || || ||||| || || || || | ||| | || ||||| ||
Sbjct 202 ATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTG 261
Query 72211 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 72270
|| || | |||||| |||| ||||| |||||| || ||||| |||| ||| |||||
Sbjct 262 TAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTAGCTA 321
Query 72271 CCACTGGCACGAAT 72284
|| ||||||| ||
Sbjct 322 CCCTTGGCACGGAT 335
>seq277695
Length=258
Score = 93.3 bits (102), Expect = 6e-14
Identities = 130/180 (72%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 70825 GCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACT-CCATCCGTAAAAATG 70883
|| || ||||| || || ||||| || || || | ||| |||| ||| || |||| ||
Sbjct 258 GCCTTGGTACGGAGGTAATACATCCCCGTCTTCAATCCG-GACTGCCACGCGAAAAAGTG 200
Query 70884 CATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTG 70943
||| || ||||| ||| | || | ||| ||||| || || | ||| || || ||
Sbjct 199 CATCGAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTG 140
Query 70944 ATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCA 71003
|||||||| ||||||||||| || ||||| || ||||| ||||| || | || |||||
Sbjct 139 GTCGATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCA 80
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 660918815417480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |