Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1211838 136 6e-27
seq1055522 118 2e-21
seq1170154 116 5e-21
seq1215792 100 4e-16
seq445917 93.3 6e-14
>seq1211838
Length=1880
Score = 136 bits (150), Expect = 6e-27
Identities = 216/308 (70%), Gaps = 4/308 (1%)
Strand=Plus/Plus
Query 124999 TTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||| ||| ||| |||||||| ||| |||||||| ||||| | ||||| || |||
Sbjct 95 TTCCCTATCCAGTACCATGACATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGG 154
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| | ||||||||||| || ||||||||| || | |||||| | | | | ||
Sbjct 155 ACAGCAGAAGAGGTCGACCTATCCAAGGACATGGCTCACTGGGAGGCCC---TCAAAGAT 211
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||| | | || || |||||| | |||||||||||||||| || || |||||||||
Sbjct 212 GGAGAGAGGCATTTCATCTCGCACGTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTC 271
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT 125237
||||| ||||| || ||| ||| || || || || | |||| | ||| ||
Sbjct 272 AACGAGAATCTCGTGGAACGGTTCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTC 331
Query 125238 TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297
||||| ||||| || || ||||| ||||| || || |||||| | |||| ||
Sbjct 332 TACGGTTTCCAGATTGCTATGGAGAATGTGCATTCCGAGATGTACAGTCTGTTGATAGAT 391
Query 125298 ATGTACAT 125305
| ||||||
Sbjct 392 ACGTACAT 399
>seq1055522
Length=411
Score = 118 bits (130), Expect = 2e-21
Identities = 175/246 (71%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921
|||| ||||| || |||||||| || || || ||||| | || |||| ||||||
Sbjct 250 CACGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGCGCGTTCGCAATCTATCTGGAAC 191
Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981
| |||||||||||||| || || || |||| | |||||| | ||| || || |
Sbjct 190 CCTGGCACGCGGACGTCTTCGAATTCCTCGATCTCAAGAAAAACACGGGCAAGGAGGAAG 131
Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040
||||||||||||||||| || || |||||| | || || |||||||| ||||||||
Sbjct 130 TTCGAGCCAGGGACTTGTTCTACGCCCTCTGGATTCCCGACCTGTTCATGGAGCGCGTCG 71
Query 97041 -AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTG 97099
| || ||| | ||||| || ||||| || || | |||||||| |||| ||
Sbjct 70 AGAAGAACCTGG--ATTGGAGTCTGATGTGTCCGCACGATTGTCCCGGTCTTGCCGACTG 13
Query 97100 CTGGGG 97105
|||||
Sbjct 12 TTGGGG 7
>seq1170154
Length=949
Score = 116 bits (128), Expect = 5e-21
Identities = 136/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429
||||| | |||| ||| ||||||| | |||| | | || | | ||| ||| |
Sbjct 2 AAGGCCGACTGGGCTCTTCAGTGGATCTGTCACGAGAGTGCATCCTTTGGCGAGAGAATC 61
Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489
| ||||| || || || ||||| |||||||| || ||||||||||| ||||| || |||
Sbjct 62 ATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGTTTTGCCGCCATTTTCTGG 121
Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549
| ||||| || ||||||||||| || || || ||| |||||||| || ||||||||
Sbjct 122 TTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAACGAGTTGATCTCTCGAGAT 181
Query 125550 GAGG 125553
||||
Sbjct 182 GAGG 185
>seq1215792
Length=2710
Score = 100 bits (110), Expect = 4e-16
Identities = 212/317 (67%), Gaps = 12/317 (4%)
Strand=Plus/Minus
Query 127356 AAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTACGGCATGCTTTCGAA 127415
||| ||| | ||||||| ||| |||| ||||| || || || ||||| |||||
Sbjct 2708 AAGCTTGTCGTAGTCGATGAGCCCAGAGACGGGATCGACTTTATAAGGCATCGACTCGAA 2649
Query 127416 AAAGAGTGATGTAGCGGACACGTT--------GCG----GAATCCGTGCGTCAGGTGGCC 127463
|| | || || ||||| | || ||| ||| |||||||| || || ||
Sbjct 2648 GAAAATGGAGGTGGCGGAAATCTTCTTGGTCTGCGTGAAGAAGCCGTGCGTAAGATGTCC 2589
Query 127464 TCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACGATTCCAGTGTACAC 127523
|||||||||| || ||||||||||| | |||||||| | |||| | ||| ||
Sbjct 2588 ACCGTCGGGCAAGTCCAGTCCCATGATGCGTCCGTGCGGCTCCACGACCGCGGTGAGAAC 2529
Query 127524 GGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCCCATTCGGACTCGTT 127583
|||||||||||| || ||||||||||| || || |||||||| ||| | |
Sbjct 2528 GGCAAAGTTGGCGGGAGATCCCGAGTACGGCTGGACGTTGACTCCCCACTCGTCCGGACT 2469
Query 127584 CAAATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGATGCGATCGATAAACTC 127643
||| ||| ||||| ||| || |||| | ||| || || ||||| ||||
Sbjct 2468 CAATTTGTACGCTTCGAGCGCGCGACGCTGGCACAACAGCTCAATCTCGTCGATGTACTC 2409
Query 127644 GTTACCACCATAGTATC 127660
||| || || || ||||
Sbjct 2408 GTTGCCTCCGTAATATC 2392
>seq445917
Length=313
Score = 93.3 bits (102), Expect = 6e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 127459 TGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACGATTCCAGTG 127518
|| || |||| || ||||||||||||||||||| |||| || || | || |||||
Sbjct 20 TGTCCGCCGTGCGGTAGATCGAGTCCCATGATTCGGTCGTGAGGCTTCATGAGGGCAGTG 79
Query 127519 TACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCCCATTC 127574
||| |||||||||| ||| |||||||||||| || || || ||||||||| ||
Sbjct 80 TACGCGGCAAAGTTTGCCGGCGAGCCCGAGTAGGGCTGGACGTTCACTCCCCACTC 135
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729774044815480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |