Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq985049 116 3e-21 seq1030155 95.1 9e-15 >seq985049 Length=630 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || || || || ||||| |||||||| ||| | | | | ||||| Sbjct 364 ACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCATCTTCC 423 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 || || || |||||| | |||||||| |||||||| ||| || || |||||||| Sbjct 424 AACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 483 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| ||| | || || |||||| | |||||| |||| ||||||||||||| Sbjct 484 ATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAATGGTTTTA 543 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || ||||| || ||||| ||||| || Sbjct 544 CCCGTGAGGGTTTTCACGAAAATCTGCATTTT 575 >seq1030155 Length=683 Score = 95.1 bits (104), Expect = 9e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | | ||| | ||| || |||||||| || || || || |||||||||||| Sbjct 477 CCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAG 536 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| ||| ||||||| | ||||||||| ||| | |||| | |||||||| ||| Sbjct 537 AGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGA 596 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATC 15303 |||||||| ||||| ||| ||| || ||| | || ||||| || Sbjct 597 ATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTC 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356801671099893