Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq406137 181 3e-41 seq170843 125 2e-24 >seq406137 Length=297 Score = 181 bits (200), Expect = 3e-41 Identities = 199/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 32875 GAACTGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGAT-TTT 32933 |||||||||||||||||||||| ||||||| | |||||| ||| ||| | | || ||| Sbjct 262 GAACTGAAGTGGTCAACAAAAATTGGCCACGGCTTTAGAGCTTTCCCAAAA-CAATCTTT 204 Query 32934 CCGATTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATC 32993 | ||||| || || | ||| ||||||||||||| ||| ||||| || |||||||| | Sbjct 203 CTGATTCATTGGGTGTTAATCCACCGTTATATTGGTGGGGTCTGAGCTGGCTGTAATAGC 144 Query 32994 CAACGATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCG 33053 ||| |||||| | ||||| || | ||| ||||| || | ||||| || || Sbjct 143 CAATGATATAATTAGTTATCGCTTTGTTTGCTTCGCTAAAATTAACGTAGCCACTTTTCG 84 Query 33054 GCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGT 33113 | | |||||| |||||| || | ||| ||||||||||| |||||||||||||| || | Sbjct 83 GTACCCATTCTGACTTCAGGCTGCGGAAAAAGCGTTCCATCGGGCTGTTATCCCAACAAT 24 Query 33114 TTCCGCGCCGGCTCATACTCTG 33135 |||| ||||| ||||| || || Sbjct 23 TTCCTCGCCGACTCATGCTTTG 2 >seq170843 Length=231 Score = 125 bits (138), Expect = 2e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 33289 CATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCA 33348 ||| |||||||| | ||| || | | |||| || || || || || || || ||||| Sbjct 1 CATTGCCCAGCCTATTGGCTTGCGAGAAAACAAATCCAGTACCACCGCCAGATAAGCCCA 60 Query 33349 GCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCAC 33408 ||| || |||||||||| ||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct 61 GCGTTTGCCCGTCCAGAGATACGTCACATCACCGCACCAGACCTGATTAGGCTCCGTCAC 120 Query 33409 GGCGAACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTC 33450 |||||||| | || || | || |||||| | ||||| || Sbjct 121 CGCGAACTGACGATCCAGATGATTCGGGATATCCACATGCTC 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123010287942130