Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq193207 107 1e-18 seq299751 96.9 2e-15 seq366440 95.1 6e-15 seq357312 95.1 6e-15 seq1030639 93.3 2e-14 seq597389 89.7 3e-13 seq1170742 87.8 9e-13 seq1102364 87.8 9e-13 seq1089640 87.8 9e-13 seq991363 87.8 9e-13 seq827369 87.8 9e-13 seq377674 87.8 9e-13 seq37167 87.8 9e-13 seq1202002 86.0 3e-12 seq783763 86.0 3e-12 seq759596 86.0 3e-12 seq676229 86.0 3e-12 seq570693 84.2 1e-11 >seq193207 Length=237 Score = 107 bits (118), Expect = 1e-18 Identities = 75/85 (88%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 92 AAAAAAGAAAT-GGCCCATGGGGGGATCGAACACACGACCTTCGCGTTATTAGCACGACG 34 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 33 CTCTAACCAACTGAGCTAATGGGCC 9 >seq299751 Length=265 Score = 96.9 bits (106), Expect = 2e-15 Identities = 57/60 (95%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1 TCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 60 >seq366440 Length=286 Score = 95.1 bits (104), Expect = 6e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 286 GATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGC 227 Query 11529 C 11529 | Sbjct 226 C 226 >seq357312 Length=283 Score = 95.1 bits (104), Expect = 6e-15 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 11469 GATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGC 11528 ||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 283 GATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGC 224 Query 11529 C 11529 | Sbjct 223 C 223 >seq1030639 Length=484 Score = 93.3 bits (102), Expect = 2e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 484 CGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 427 >seq597389 Length=371 Score = 89.7 bits (98), Expect = 3e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 11472 CGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 371 CGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCC 314 >seq1170742 Length=1037 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1036 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 987 >seq1102364 Length=837 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 50 >seq1089640 Length=722 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 718 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 669 >seq991363 Length=613 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq827369 Length=493 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 50 >seq377674 Length=289 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq37167 Length=206 Score = 87.8 bits (96), Expect = 9e-13 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 5 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 54 >seq1202002 Length=1562 Score = 86.0 bits (94), Expect = 3e-12 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCCG 51 >seq783763 Length=466 Score = 86.0 bits (94), Expect = 3e-12 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 11481 GACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 466 GACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 418 >seq759596 Length=452 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC--GTCGACGA 11537 ||||||||||||||||||||||||||||| |||| ||||||||||||||| | ||||| Sbjct 449 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCCAGGCTGACGA 390 Query 11538 TTGTG 11542 | ||| Sbjct 389 TCGTG 385 >seq676229 Length=264 Score = 86.0 bits (94), Expect = 3e-12 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCCG 51 >seq570693 Length=361 Score = 84.2 bits (92), Expect = 1e-11 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 11480 CGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct 358 CGACCTTCGCGTTATTAGCACGACGCTCTAACCAGCTGAGCTAATGGGCC 309 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 257608656537748