Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq1033248 116 6e-21
seq1119540 102 1e-16
>seq1033248
Length=572
Score = 116 bits (128), Expect = 6e-21
Identities = 258/382 (68%), Gaps = 4/382 (1%)
Strand=Plus/Minus
Query 193728 GGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATC 193787
|||||||| ||| |||| || || | |||| || | ||||| ||||| || |
Sbjct 417 GGAACTCTCAGATTACTCGACGCGATACGTACGTGCAGCATGGAAAAAGAAGTCAAGTTT 358
Query 193788 TATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACC 193847
||||| || ||||| ||||||||| || || | | || | |||||||
Sbjct 357 TATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACT 298
Query 193848 ACACCATTTCATCCACGCTCTCCTTATG-GTGTAGCAAAGTTGTATGGTTATTGGATCAT 193906
|| || ||| | || || || ||||| | |||| || ||| | || | |||||||| |
Sbjct 297 ACTCCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATAGT 239
Query 193907 CAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGA 193966
| || || |||||| |||| | | ||| || || || ||||||||||||||
Sbjct 238 CGTTAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGA 179
Query 193967 ATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGAT 194026
| ||| ||||||||||||| || || ||||| ||||| || | | || | || ||
Sbjct 178 AAGTCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAAT 119
Query 194027 C-TCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085
| || || ||| || | |||| | ||||||||||| || | || || || ||||
Sbjct 118 CGTCCTAGGGCTTATTGATTA-TCTTGAACTTGGTAATCTGGATTCGAAAAGAGACTGGG 60
Query 194086 GACACGCAAAGGATTATGTTGA 194107
| || || | ||||||||| ||
Sbjct 59 GTCATGCCAGGGATTATGTAGA 38
>seq1119540
Length=600
Score = 102 bits (112), Expect = 1e-16
Identities = 255/382 (67%), Gaps = 4/382 (1%)
Strand=Plus/Minus
Query 193728 GGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATC 193787
|||||||| ||| |||| || || | |||| || | |||| ||||| || |
Sbjct 417 GGAACTCTCAGATTACTCGACGCGATACGTACGTGCAGCTTGGAAAAAGAAGTCAAGTTT 358
Query 193788 TATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACC 193847
||||| || ||||| ||||||||| || || | | |||| |||||||
Sbjct 357 TATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACT 298
Query 193848 ACACCATTTCATCCACGCTCTCCTTATG-GTGTAGCAAAGTTGTATGGTTATTGGATCAT 193906
|| || ||| | || || || ||||| | |||| || ||| | || | || ||||| |
Sbjct 297 ACCCCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTACTGGATAGT 239
Query 193907 CAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGA 193966
| || || |||||| |||| | | ||| || || || |||||||| |||||
Sbjct 238 CGTTAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGA 179
Query 193967 ATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGAT 194026
| ||| |||||||| |||| || || ||||| ||||| || | | || | || ||
Sbjct 178 AAGTCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAAT 119
Query 194027 CTCTGTTGGA-TTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085
| | | || ||| || ||||| | ||||||||||| || | || || || ||||
Sbjct 118 CGTTCTAGGGCTTATTGATT-TTCTTGAACTTGGTAATCTGGATTCGAAAAGAGACTGGG 60
Query 194086 GACACGCAAAGGATTATGTTGA 194107
| || || | ||||||||| ||
Sbjct 59 GTCATGCCAGGGATTATGTAGA 38
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795257416297880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |