Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq1033248 116 6e-21 seq1119540 102 1e-16 >seq1033248 Length=572 Score = 116 bits (128), Expect = 6e-21 Identities = 258/382 (68%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 193728 GGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATC 193787 |||||||| ||| |||| || || | |||| || | ||||| ||||| || | Sbjct 417 GGAACTCTCAGATTACTCGACGCGATACGTACGTGCAGCATGGAAAAAGAAGTCAAGTTT 358 Query 193788 TATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACC 193847 ||||| || ||||| ||||||||| || || | | || | ||||||| Sbjct 357 TATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACT 298 Query 193848 ACACCATTTCATCCACGCTCTCCTTATG-GTGTAGCAAAGTTGTATGGTTATTGGATCAT 193906 || || ||| | || || || ||||| | |||| || ||| | || | |||||||| | Sbjct 297 ACTCCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATAGT 239 Query 193907 CAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGA 193966 | || || |||||| |||| | | ||| || || || |||||||||||||| Sbjct 238 CGTTAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGA 179 Query 193967 ATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGAT 194026 | ||| ||||||||||||| || || ||||| ||||| || | | || | || || Sbjct 178 AAGTCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAAT 119 Query 194027 C-TCTGTTGGATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085 | || || ||| || | |||| | ||||||||||| || | || || || |||| Sbjct 118 CGTCCTAGGGCTTATTGATTA-TCTTGAACTTGGTAATCTGGATTCGAAAAGAGACTGGG 60 Query 194086 GACACGCAAAGGATTATGTTGA 194107 | || || | ||||||||| || Sbjct 59 GTCATGCCAGGGATTATGTAGA 38 >seq1119540 Length=600 Score = 102 bits (112), Expect = 1e-16 Identities = 255/382 (67%), Gaps = 4/382 (1%) Strand=Plus/Minus Query 193728 GGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATC 193787 |||||||| ||| |||| || || | |||| || | |||| ||||| || | Sbjct 417 GGAACTCTCAGATTACTCGACGCGATACGTACGTGCAGCTTGGAAAAAGAAGTCAAGTTT 358 Query 193788 TATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACC 193847 ||||| || ||||| ||||||||| || || | | |||| ||||||| Sbjct 357 TATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACT 298 Query 193848 ACACCATTTCATCCACGCTCTCCTTATG-GTGTAGCAAAGTTGTATGGTTATTGGATCAT 193906 || || ||| | || || || ||||| | |||| || ||| | || | || ||||| | Sbjct 297 ACCCCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTACTGGATAGT 239 Query 193907 CAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGA 193966 | || || |||||| |||| | | ||| || || || |||||||| ||||| Sbjct 238 CGTTAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGA 179 Query 193967 ATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGAT 194026 | ||| |||||||| |||| || || ||||| ||||| || | | || | || || Sbjct 178 AAGTCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAAT 119 Query 194027 CTCTGTTGGA-TTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085 | | | || ||| || ||||| | ||||||||||| || | || || || |||| Sbjct 118 CGTTCTAGGGCTTATTGATT-TTCTTGAACTTGGTAATCTGGATTCGAAAAGAGACTGGG 60 Query 194086 GACACGCAAAGGATTATGTTGA 194107 | || || | ||||||||| || Sbjct 59 GTCATGCCAGGGATTATGTAGA 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795257416297880