Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1055522 104 6e-17 seq22873 96.9 9e-15 >seq1055522 Length=411 Score = 104 bits (114), Expect = 6e-17 Identities = 218/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 363733 AGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTT 363791 || ||||| |||||| | || ||| || || || | ||||| ||| | || || | Sbjct 320 AGCTACATCGCCGGCACCAACGGCATA-TCCAACGGTATAGTTCCTATGTTGCGCGTCTA 262 Query 363792 TGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTAT 363851 |||| || || | ||||||||||| || || |||||| || ||||| || || Sbjct 261 CAACAACACAGCACGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGCGCGTTCGCAAT 202 Query 363852 GTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGG 363911 ||||| || || || || || | || || || || || ||| |||||||||||| Sbjct 201 CTATCTGGAACCCTGGCACGCGGACGTCTTCGAATTCCTCGATCTCAAGAAAAACACGGG 142 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 || |||||| | || || | || ||||||| || || ||| || | |||| || || Sbjct 141 CAAGGAGGAAGTTCGAGCCAGGGACTTGTTCTACGCCCTCTGGATTCCCGACCTGTTCAT 82 Query 363972 GAAGCGCGTGGAGGCAGGTA--AGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGT 364029 | ||||||| ||| | | | | ||||| || | || || ||||| ||||| ||| Sbjct 81 GGAGCGCGTCGAG--AAGAACCTGGATTGGAGTCTGATGTGTCCGCACGATTGTCCCGGT 24 Query 364030 CTTTCCGA-TGTATGGGG 364046 ||| |||| ||| ||||| Sbjct 23 CTTGCCGACTGT-TGGGG 7 >seq22873 Length=202 Score = 96.9 bits (106), Expect = 9e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 364779 GATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGT 364838 ||||||||| || ||||| | ||||||||||| || ||| | || | |||||||| Sbjct 1 GATCCTCGGCAATAACGAATCCTTCGAACCGTACACTTCCAACATCTACACCCGCCGGGT 60 Query 364839 TCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGG 364898 ||| ||||||||||| | ||| || || | |||| | | |||||| |||| |||| Sbjct 61 TCTCTCCGGAGAATTCCAGGTCGTCAACCATCACCTCCTGAGGGATCTCACCGAGAGCGG 120 Query 364899 GCTGTGGGGTGACAGCATGAAGAACTATATCATCGC 364934 | | ||| ||| |||||||||| | |||||||| Sbjct 121 GATCTGGAACGACGACATGAAGAACCAGATCATCGC 156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1283009393589486