Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq460139 149 4e-31
seq297675 125 5e-24
seq985049 122 6e-23
>seq460139
Length=318
Score = 149 bits (164), Expect = 4e-31
Identities = 189/260 (73%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || ||||| || || || || || ||||| ||||| |||||||| ||| |||||
Sbjct 260 CCCACTAAATACTTTGGCTGTGAGCTCGGCGCCCAGACCCAGTTTGACTTCAAGAACGAT 201
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440
||||||||||| ||||| ||||| | | | |||||||||||| | | ||||||||
Sbjct 200 CGCTTCATCGTGAACGGCTCGCACGAGGCCGTGAAGCTGCAGGACCTGTTGGACGGCTTC 141
Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCT 6500
|| |||||||||||| |||||| | ||||| ||||||||||||| | | | |||||
Sbjct 140 ATACGCAAGTTTGTGTTGTGTCCCGGCTGCGACAACCCGGAGACCGTGTTGCTGGTGTCG 81
Query 6501 ACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGAT 6560
|||| |||||| ||| ||||| || ||||| | ||| ||| ||| ||
Sbjct 80 CAGAAGAAGGGGACCATCAGCCAGACGTGCAAGGCTTGCGGCTTCCACGGCCCGCTAGAG 21
Query 6561 TTATCACACAAACTCAACAC 6580
|| ||||| || |||||
Sbjct 20 TTCAACCACAAGCTGAACAC 1
>seq297675
Length=264
Score = 125 bits (138), Expect = 5e-24
Identities = 129/169 (76%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 6150 GTATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGC 6209
||||| || |||||||| | ||||||| |||||| | || |||||||||||
Sbjct 247 GTATCAGTCAAGATGGGGAGCGTGAACGTGAATCGTTCCATCAGCGATGCGTTCTACCGT 188
Query 6210 TACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTC 6269
||||| ||||| || |||| |||||||||||||| ||||||||||| || || || ||
Sbjct 187 TACAAGATGCCCCGGATCTTAGCCAAGGTCGAGGGCAAGGGAAACGGCATCAAGACTGTT 128
Query 6270 ATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318
|||||||||||| ||||| || ||||| | ||| | || || ||||
Sbjct 127 ATTGTCAACATGATAGAAGTTGCAAAGGCCATAGGAAGACCCGCTACCT 79
>seq985049
Length=630
Score = 122 bits (134), Expect = 6e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||| ||||| || || || |||||||| || ||||| || |||
Sbjct 346 CCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGAC 405
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
|| ||| | || || || || || || || || || | || ||||| || | |||
Sbjct 406 AAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGG 465
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| |||||||| || || ||| ||||||| || |||||| | ||| |||
Sbjct 466 ATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACT 525
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|||| ||||| ||||||||||| | |||||||||||| |||||||| ||
Sbjct 526 TCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTT 575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 329974003725863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |