Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq460139 149 4e-31 seq297675 125 5e-24 seq985049 122 6e-23 >seq460139 Length=318 Score = 149 bits (164), Expect = 4e-31 Identities = 189/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || ||||| || || || || || ||||| ||||| |||||||| ||| ||||| Sbjct 260 CCCACTAAATACTTTGGCTGTGAGCTCGGCGCCCAGACCCAGTTTGACTTCAAGAACGAT 201 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 ||||||||||| ||||| ||||| | | | |||||||||||| | | |||||||| Sbjct 200 CGCTTCATCGTGAACGGCTCGCACGAGGCCGTGAAGCTGCAGGACCTGTTGGACGGCTTC 141 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCT 6500 || |||||||||||| |||||| | ||||| ||||||||||||| | | | ||||| Sbjct 140 ATACGCAAGTTTGTGTTGTGTCCCGGCTGCGACAACCCGGAGACCGTGTTGCTGGTGTCG 81 Query 6501 ACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGAT 6560 |||| |||||| ||| ||||| || ||||| | ||| ||| ||| || Sbjct 80 CAGAAGAAGGGGACCATCAGCCAGACGTGCAAGGCTTGCGGCTTCCACGGCCCGCTAGAG 21 Query 6561 TTATCACACAAACTCAACAC 6580 || ||||| || ||||| Sbjct 20 TTCAACCACAAGCTGAACAC 1 >seq297675 Length=264 Score = 125 bits (138), Expect = 5e-24 Identities = 129/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 6150 GTATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGC 6209 ||||| || |||||||| | ||||||| |||||| | || ||||||||||| Sbjct 247 GTATCAGTCAAGATGGGGAGCGTGAACGTGAATCGTTCCATCAGCGATGCGTTCTACCGT 188 Query 6210 TACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTC 6269 ||||| ||||| || |||| |||||||||||||| ||||||||||| || || || || Sbjct 187 TACAAGATGCCCCGGATCTTAGCCAAGGTCGAGGGCAAGGGAAACGGCATCAAGACTGTT 128 Query 6270 ATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 |||||||||||| ||||| || ||||| | ||| | || || |||| Sbjct 127 ATTGTCAACATGATAGAAGTTGCAAAGGCCATAGGAAGACCCGCTACCT 79 >seq985049 Length=630 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| ||||| || || || |||||||| || ||||| || ||| Sbjct 346 CCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGAC 405 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| | || || || || || || || || || | || ||||| || | ||| Sbjct 406 AAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGG 465 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| |||||||| || || ||| ||||||| || |||||| | ||| ||| Sbjct 466 ATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACT 525 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 |||| ||||| ||||||||||| | |||||||||||| |||||||| || Sbjct 526 TCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTT 575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 329974003725863