Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq116470 251 9e-62
seq1197690 174 2e-38
seq1055522 125 9e-24
seq1170154 82.4 1e-10
seq277695 82.4 1e-10
>seq116470
Length=220
Score = 251 bits (278), Expect = 9e-62
Identities = 194/227 (85%), Gaps = 10/227 (4%)
Strand=Plus/Plus
Query 33452 GAGCCAGCGCTTGTCCGAGGACCTCTCCGTGGTCATGTGGCCGGCATGACTAGACAC--- 33508
||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |
Sbjct 1 GAGCCAGCGCT-GTCCGAAGACGCTTCCGTGGTCATGTGGCCGGCATGACTAGACGCTTT 59
Query 33509 CAAAGGCGCACGGAACGCTGTTACCTTCCCACCGTAGTGGTCCCTATTTTTCTACTTGCA 33568
|| |||||||| ||||||||||||||||||| |||||| ||||||| ||||||||||
Sbjct 60 CA----CGCACGGAGCGCTGTTACCTTCCCACCGAAGTGGTTCCTATTTATCTACTTGCA 115
Query 33569 TTTTTACATGCTTTCGAACTGCTAGGTTGGTAGAAGCTGGGACGAGTAACAGGAGCTCAC 33628
||| |||||||||||||||||||||||| || ||||||| | ||||| |||||||||
Sbjct 116 TTTG--CATGCTTTCGAACTGCTAGGTTGGCAGGAGCTGGGGCAAGTAATGGGAGCTCAC 173
Query 33629 TCTGTTACGCAGCACTCGGGATTTGAACCGCCAAACTGCCGACCTTC 33675
|| |||||||||||| |||||| |||| || ||||||||||||||
Sbjct 174 TCCATTACGCAGCACTAGGGATTCGAACTGCTGAACTGCCGACCTTC 220
>seq1197690
Length=1171
Score = 174 bits (192), Expect = 2e-38
Identities = 461/694 (66%), Gaps = 10/694 (1%)
Strand=Plus/Plus
Query 63395 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 63454
||||| || || || ||||| || || || |||| | ||| || |||||||| |
Sbjct 292 GTATCGTAAATCCCTTCTATGCTGTCGTCTGACATGGCCAATAGGAAGCAGCTAGATAAC 351
Query 63455 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCA 63514
|| | | ||| | ||| | || | ||| || ||||| ||||| || || ||
Sbjct 352 TGAGGTCTTGGAGTAGCAGCACTGAAGAGGGTCGGGGAAGCATGAGTGAAGTATCGCTCC 411
Query 63515 GAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCG 63574
|| | |||| ||| ||||||||||| || || || || | || || ||||| |||
Sbjct 412 GACAAAAGATCGTAGGTCTCAATAGCGGAATCAATGTCTTCTCCGTGGATGCCTACAGCG 471
Query 63575 ACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA-CAAGTA 63633
|||||||| | ||||||||| || | ||| |||| ||| || | | | || ||||||
Sbjct 472 ACACGCATCAGCATGTGCTGCGGACGTTCGACGA-CTTTCTGATCAATGCGAAGCAAGTA 530
Query 63634 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATA 63691
|| |||| |||||||| ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 531 CGAACGCTCCAGCGTTTTAAATCCAAAGTAATTGTAGCTGAAA--TCTCGATCGTAGATT 588
Query 63692 ATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT-AATACTTGAAAT 63750
||| | || || ||| ||| || || || ||| | | |||| || | ||| ||
Sbjct 589 ATAGCGGAATTAAGTCGATCAGCATTCTTTGAAATTACTTGC-TGGTGAAAATCTGAGAT 647
Query 63751 AATAGGAAAATGTTTC-CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTT 63809
|| || | || | ||| | | | |||| || ||||| ||||| || |
Sbjct 648 CATTGGGGTAGCCCTCTTCGTTTCTTTGTTATACAT-CTTATGCAAATCTTCCATAACAT 706
Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869
|||| || ||| ||||| || ||||| | ||||| || || || | || || || |
Sbjct 707 CACTGAAAGATTTCTTTGTCTCCTTGTGCAAGTTTGAGACTGCAATACGTGCAGCAAGGA 766
Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929
| |||||||| || |||| || || ||||| || |||||||||||| | | || |
Sbjct 767 TAGCATAATCAGGGTGTTTAGTGGTCATTGTGGCGGCCGTTTCGGCTGCCAAATTATCAA 826
Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAG 63989
|| || ||||| || ||| ||| | || | ||| |||||||| | |||| | |
Sbjct 827 GCTCGACAGTTGTAACGCCAGGATAGAGACCGTTGATTACCTTCATCGTTATTGCAGCCG 886
Query 63990 GATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGATGTGATTTTAT 64049
| || | | ||| |||| | ||||| || | |||| ||| ||||| || || || |
Sbjct 887 GTTCCAGAAAATCCATGTTGAGACCATAGCAAAGTTTTTGAATTCGAGAGGTTATCTTGT 946
Query 64050 CAAACATGACATTTTCCTTGTATCCATTTCGTTT 64083
| || ||| | ||| || ||||| |||||
Sbjct 947 CGAAATGGACCTCTTCTTTACGTCCATCGCGTTT 980
>seq1055522
Length=411
Score = 125 bits (138), Expect = 9e-24
Identities = 228/331 (69%), Gaps = 2/331 (1%)
Strand=Plus/Plus
Query 63004 TCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTC 63063
||||||| | | | || || ||||| || | ||||||||||| ||| || ||
Sbjct 6 TCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTT 65
Query 63064 ATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAATAGATCTCTGG 63122
| || || || | ||| || || || |||||||| || || || || || || ||||
Sbjct 66 CTTCTCGACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAG-TCCCTGG 124
Query 63123 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 63182
|| | |||||| || || || || || || ||||||||||| | | | || | |
Sbjct 125 CTCGAACTTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGT 184
Query 63183 GCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 63242
|||| ||||||| || || || | | || || || ||||| || || || || | ||
Sbjct 185 GCCAGGGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGT 244
Query 63243 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 63302
| | || ||||| || || || | |||||| |||| ||||| |||||| | || ||||
Sbjct 245 AACGTGCTGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGG 304
Query 63303 TCCCTGAGATATAGCTTCCACTGGCACGAAT 63333
| || | ||| ||||| || ||||||| ||
Sbjct 305 TGCCGGCGATGTAGCTACCCTTGGCACGGAT 335
>seq1170154
Length=949
Score = 82.4 bits (90), Expect = 1e-10
Identities = 147/212 (69%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 32475 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 32534
|||| || |||| | |||||||||||| || || || || | ||||| | | |||
Sbjct 727 CCCAGCTCGGAAAGAAGTCTATCTGCGACGAACTCGATGTACTGTCGCATCAGTACGCAA 668
Query 32535 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 32594
||||| || || || ||| ||||| || |||| || || ||||| ||||| ||
Sbjct 667 TTCATGCCGATGAGGGCAACAGGAAGGGCATCAGTTAGGAACTCTTGCTCAATTTTTACA 608
Query 32595 GCGTCTGTTATAATAGATCTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAA 32653
|| || | |||||| |||| || || ||| ||||| | | ||| || || ||
Sbjct 607 GCATCAATAATAATA-TTCTTGACCTCGTCCTCAGTCGGTTTCTGTACTAAGTGCTTGAA 549
Query 32654 CATCAAACATGCGAAATCGCAGTGTAGACCCT 32685
||||| || || || |||||||| |||||||
Sbjct 548 CATCAGGCACGCAAAGTCGCAGTGAAGACCCT 517
>seq277695
Length=258
Score = 82.4 bits (90), Expect = 1e-10
Identities = 126/177 (71%), Gaps = 2/177 (1%)
Strand=Plus/Minus
Query 61877 TTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCAT 61935
|| ||||| || || ||||| ||||| || | ||| |||| ||| || |||| |||||
Sbjct 255 TTGGTACGGAGGTAATACATCCCCGTCTTCAATCCG-GACTGCCACGCGAAAAAGTGCAT 197
Query 61936 ACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATC 61995
|| ||||| || | || | || || ||||| || | ||||| || || ||
Sbjct 196 CGAAGTCAGTTTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTC 137
Query 61996 GATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCCCA 62052
|||||| ||||||||||| || ||||| || || || ||||| || | || |||||
Sbjct 136 GATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCA 80
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 623982790530800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |