Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1030155 105 6e-18 seq985049 100 2e-16 >seq1030155 Length=683 Score = 105 bits (116), Expect = 6e-18 Identities = 136/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACT 25091 ||||||| | ||||| ||| | || ||||| || ||| |||| || || | ||| Sbjct 669 CCATCACTCTTGAAGTTGAGGCCTCGGACACCATTGAGAATGTGAAAGCCAAGATTCAA- 611 Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| ||||| ||||| || ||||||||| || | || || |||||||||||| | ||| Sbjct 610 GACAAGGAAGGAATTCCCCCAGACCAACAGAGGCTGATCTTCGCCGGCAAACAACTTGAA 551 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 || | ||| ||| | ||||||||| ||||| || || || || || || || || || Sbjct 550 GACGGTCGAACTCTCTCCGATTACAACATTCAGAAGGAGTCTACCCTTCACTTGGTTCTC 491 Query 25212 AGGCT 25216 || || Sbjct 490 AGACT 486 >seq985049 Length=630 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || |||||| |||| || | ||||| || | || Sbjct 573 AATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCTTC 514 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||||||| | ||| || ||| |||||||| || || ||||| ||||| Sbjct 513 CGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGACCA 454 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || || || || ||||||| || || || ||| ||||| Sbjct 453 ACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTACAA 394 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| ||||| || || || || || || Sbjct 393 CATCCAAAAGGAATCAACACTCCACTTGGTCCT 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426894074906495