Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq985049 190 4e-43 seq1119540 165 1e-35 seq1033248 159 6e-34 seq1030155 145 1e-29 seq498311 102 1e-16 seq1101710 89.7 9e-13 >seq985049 Length=630 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 346 CCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGAC 405 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| |||||||| || ||||| || | | |||||||| ||||| Sbjct 406 AAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGG 465 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| ||||| |||||||| |||||| || || | | ||||||| Sbjct 466 ATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACT 525 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 526 TCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATT 573 >seq1119540 Length=600 Score = 165 bits (182), Expect = 1e-35 Identities = 239/335 (71%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 268364 CGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGG 268423 || ||||| || || |||||||| |||| || | | || || ||||||||||||||| Sbjct 134 CGCGTGATCTTCCGAGTCACGAAACTCTCCCCTCTTCTCGGACTTTCGTGGTTGAAGAGG 193 Query 268424 ATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCA 268483 |||||||| || ||||||||| | ||||||||||||||||| ||||| ||||||| || Sbjct 194 ATGCCGTTACATGCGAACATGTCGTATGCCTCACGGTAGTTAACGACTATCCAGTACGCG 253 Query 268484 AACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCT-TTTGAGG 268542 | | ||| ||| ||||| || || || || | ||||| || || ||| | || || Sbjct 254 TAGAGCTTGGCACACGCGTAAGGTGACCGCGGGTAAAAGGGGGTAGT-TTCTGTCTGTGG 312 Query 268543 GATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTT 268602 ||||| ||| || || | || ||||| || || ||||| || ||||| | ||| Sbjct 313 TATTTCGGCGACCTTTCCGTACAGTTCGGAAGTAGACGCTTGATAAAACTTGACTTCTTT 372 Query 268603 TTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 ||| | | ||| | || || || ||||| || | |||||||| | | ||||| || Sbjct 373 TTCCAAGCTGCACGTACGTATCGCGTCGAGTAATCTGAGAGTTCCGAGCGCGTCCACCTC 432 Query 268663 CGCTGTATACTCCGGCATCTCGAATGACACCTGGA 268697 || || ||||| | ||||| || |||| || Sbjct 433 TGCCGTGTACTCGCTGAGATCGAACGAGACCTAGA 467 >seq1033248 Length=572 Score = 159 bits (176), Expect = 6e-34 Identities = 238/335 (71%), Gaps = 2/335 (1%) Strand=Plus/Plus Query 268364 CGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGG 268423 || ||||| || || |||||||| |||| || | | || || ||||| ||||||||| Sbjct 134 CGCGTGATCTTCCGAGTCACGAAACTCTCACCTCTTCTCGGACTTTCGTGATTGAAGAGG 193 Query 268424 ATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCA 268483 |||||||| || ||||||||| | ||||||||||||||||| ||||| |||| || || Sbjct 194 ATGCCGTTACATGCGAACATGTCGTATGCCTCACGGTAGTTAACGACTATCCAATACGCG 253 Query 268484 AACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCT-TTTGAGG 268542 | | ||| ||| ||||| || || || || | ||||| || || ||| | || || Sbjct 254 TAGAGCTTGGCACACGCGTAAGGTGACCGCGGGTAAAAGGGAGTAGT-TTCTGTCTGCGG 312 Query 268543 GATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTT 268602 ||||| ||| || || | || ||||| || || ||||| || ||||| | ||| Sbjct 313 TATTTCGGCGACCTTTCCGTACAGTTCGGAAGTAGACGCTTGATAAAACTTGACTTCTTT 372 Query 268603 TTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 ||| | | ||| | || || || ||||| || | |||||||| | | ||||| || Sbjct 373 TTCCATGCTGCACGTACGTATCGCGTCGAGTAATCTGAGAGTTCCGAGCGCGTCCACCTC 432 Query 268663 CGCTGTATACTCCGGCATCTCGAATGACACCTGGA 268697 ||| || ||||| | ||||| || |||| || Sbjct 433 CGCCGTGTACTCGCTGAGATCGAACGAGACCTAGA 467 >seq1030155 Length=683 Score = 145 bits (160), Expect = 1e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | | |||||||| || || ||||| || || ||||| ||||||||| Sbjct 477 CCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAG 536 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | || || |||||||| || || || |||||||| || ||| Sbjct 537 AGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGA 596 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| || || || ||| |||||||| | | || ||| Sbjct 597 ATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAACT 656 Query 68415 TCCAAGGTGATGGTTTTTCC 68434 || | |||||||| ||||| Sbjct 657 TCAAGAGTGATGGTCTTTCC 676 >seq498311 Length=330 Score = 102 bits (112), Expect = 1e-16 Identities = 129/175 (74%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 196584 TGGTTTCAACGGAAACATTTGCGATGGGCGTCAACGGGCCTGCGAGGACCGTCGTCTTCG 196643 || || | |||||||| |||||||||||||||||| ||| ||| | || |||||||||| Sbjct 139 TGTTTGCGACGGAAACGTTTGCGATGGGCGTCAACATGCCGGCGCGTACGGTCGTCTTCG 198 Query 196644 AGTCGCTCGAGAAGTTCGATGGACACGAGCGCCGCATGTTCCAGCCGCACGAGTTCATCC 196703 | || |||||||| || ||||| || | | |||| || || | ||||| Sbjct 199 ACAGTATCCGCAAGTTCGACGGCAACGAGATGCGGACGCTCCACCCCGCGGAATACATCC 258 Query 196704 AAATGGCGGGCCGGGCCGGGCGCCGAGGGTTTGACACCAACGGGCACGTCGTGGT 196758 | ||||||||||||||||| | ||||| | ||| ||||||| ||| ||||| Sbjct 259 AGATGGCGGGCCGGGCCGGCAGGCGAGGCATCGAC-TCAACGGGGACG--GTGGT 310 >seq1101710 Length=836 Score = 89.7 bits (98), Expect = 9e-13 Identities = 151/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 68249 CAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCAT 68307 ||| | |||| |||| | | ||||| || || ||||||||||| | ||||| | |||| Sbjct 446 CAAGAACAAGGTGTAACATTGACTCCTTCTGTATGTTATAATCTAAAAGTGTACGGCCAT 387 Query 68308 CTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGT 68367 |||| | ||||| || || || || | ||| ||||| || |||||||| ||||| || | Sbjct 386 CTTCAAGTTGCTTACCAGCAAAAATAAATCTCTGTTGATCAGGTGGAATTCCTTCTTTCT 327 Query 68368 CTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG-GTGATG 68426 |||| | | |||| | | ||| || || || | ||| || | ||| | || Sbjct 326 CTTGCACTAGTTCCTTTATGTACTCTATTGTTGATGAAGGTTC-ACATGTAAGTGGGACC 268 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || ||||||| ||| || |||| Sbjct 267 GTTTTACCAGTCAGAGTCTTGAAGAAAATTCGCAT 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 907587553923560