Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1170616 111 4e-21 seq638435 77.0 8e-11 seq22856 77.0 8e-11 >seq1170616 Length=688 Score = 111 bits (122), Expect = 4e-21 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| |||| || |||||||| | | || ||||| || ||||| |||||||||| Sbjct 133 ACCCGATGAGCCGCGTCTTTCCGAAGGTGACCAAGTGTACATTCCACAAGTACGGTCCTT 192 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| ||||||||| |||| || ||| | |||||||||| Sbjct 193 CGGGTACCGTGCAGAAGTTCGACGGACTCTGCGTCCTACCCCTCAACATCGTCAACGAGA 252 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||| | ||||||||||| |||||| Sbjct 253 AGATCTACGTGTTCCTCTGGTTTTGGTTC 281 >seq638435 Length=390 Score = 77.0 bits (84), Expect = 8e-11 Identities = 57/67 (85%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 3424 ATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTAC 3483 || ||||| |||||| |||||||||||||||||||| ||||| |||||||||||| | Sbjct 388 ATTCTCCCCCTGAACGTCGTCAACGAGAAGATCTACATCTTCCTGTGGTTCTGGTTCATC 329 Query 3484 GTGCTAG 3490 |||||| Sbjct 328 CTGCTAG 322 >seq22856 Length=202 Score = 77.0 bits (84), Expect = 8e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 3419 TCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGT 3478 |||| || ||||| |||||| |||||||||||||||||||| ||||| |||||||||| Sbjct 141 TCTGTATTCTCCCCCTGAACGTCGTCAACGAGAAGATCTACATCTTCCTGTGGTTCTGGT 200 Query 3479 TC 3480 || Sbjct 201 TC 202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12313705735500