Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1055522 152 1e-31 seq1002630 138 2e-27 seq1211838 129 1e-24 seq277695 100 5e-16 seq261774 100 5e-16 seq261775 91.5 3e-13 >seq1055522 Length=411 Score = 152 bits (168), Expect = 1e-31 Identities = 232/328 (71%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCG 244990 ||||| ||||| ||| | || ||||| || ||| ||||| |||||||| || Sbjct 1 TCGGGTCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCC 60 Query 244991 CCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCC 245050 | | || ||| | || |||||| |||||||| ||||||||||| | ||| | |||| Sbjct 61 AGGTTCTTCTCGACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCC 120 Query 245051 CTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCG 245110 |||| | || ||| ||| ||||| ||| | || || | || || |||||||| Sbjct 121 CTGGCTCGAACTTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCC 180 Query 245111 ACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCC 245170 |||||||||| |||| |||| |||| |||||||| ||||||||||| || ||||| Sbjct 181 GCGTGCCAGGGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCG 240 Query 245171 AC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || | | | | | |||| ||| ||||| |||| ||||| ||||| || ||| Sbjct 241 ACGTAACGTGCTGTG-TTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCC 299 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTG 245257 ||||||||| ||||||| |||||| Sbjct 300 GTTGGTGCCGGCGATGTAGCTACCCTTG 327 >seq1002630 Length=654 Score = 138 bits (152), Expect = 2e-27 Identities = 332/499 (67%), Gaps = 19/499 (4%) Strand=Plus/Plus Query 244300 CCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGG 244359 ||||||||| |||| || | |||||||||||| || | || ||||| || | ||| || Sbjct 173 CCACATGTCGTACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGG 232 Query 244360 ACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAA 244419 || || || ||| || | |||||| | || | ||| |||| ||||| || || || Sbjct 233 GCCTTCTTTCTCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAA 292 Query 244420 GATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAA 244479 |||| ||| | | | || | ||| ||| || | ||||| ||||| Sbjct 293 GATCTGGACGTTGAGTTTCTGAGCTTCTTCGCTCTCGAACGGATAACGCATCAGGATGAA 352 Query 244480 GACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCAT 244539 || || || || ||||| | |||||| |||||||||| || ||| |||| ||| | | Sbjct 353 GAGATCCGCGAGACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTT 412 Query 244540 GGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCAT 244599 || ||||| | ||||| |||||| ||||||| | || || ||||| |||| Sbjct 413 CGCCTCGGGAATCGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTTTTCGTGA---- 468 Query 244600 GCGGACGACGT--CGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTG 244657 ||| | ||| | || |||| ||| | ||| | | || | || | || Sbjct 469 -CGGTCTTCGTGACCTCCTTGAGCTTC---TCGAAATCGAACG--TCTTGTTCGGTT-TG 521 Query 244658 ATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAG 244717 || || ||||| ||||| ||| |||||||| ||||||||||| |||| Sbjct 522 ATGTACAT------GTTGACGGCGATCGAGGCGAGGTTGCAAACGGCCACCTCTTCCGGC 575 Query 244718 TTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGG 244777 ||| ||| ||||||||| ||||||||||| ||||| || ||||| || | ||| Sbjct 576 GAAGTGAACTCGACAATCTCCGTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGC 635 Query 244778 TGATTGGACTTGGCGTTGC 244796 || || ||||| | ||||| Sbjct 636 TGGTTCGACTTTGAGTTGC 654 >seq1211838 Length=1880 Score = 129 bits (142), Expect = 1e-24 Identities = 194/276 (70%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 ||| || |||| ||||||||| |||||||||||||| | ||| |||||| || Sbjct 101 ATCCAGTACCATGACATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGGACAGCA 160 Query 42345 GAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAG 42404 || ||| | ||||| ||||||||| ||| ||||||| | || || || | | Sbjct 161 GAAGAGGTCGACCTATCCAAGGACATGGCTCACTGGGAGGCCCTCAAAGATGGAGAGAGG 220 Query 42405 TTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAAC 42464 |||| || || | |||||||||| ||||| || ||||| || ||||| ||||| Sbjct 221 CATTTCATCTCGCACGTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTCAACGAGAAT 280 Query 42465 CTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTC 42524 || | |||||| | || |||||| |||||||| || |||||||| ||| Sbjct 281 CTCGTGGAACGGTTCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTACGGTTTC 340 Query 42525 CAGATAGCCATAGAGAACGTGCACTCTGAGGTGTAC 42560 ||||| || || ||||| ||||| || ||| ||||| Sbjct 341 CAGATTGCTATGGAGAATGTGCATTCCGAGATGTAC 376 >seq277695 Length=258 Score = 100 bits (110), Expect = 5e-16 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAG 243933 || |||||| || ||||||||||||| ||| | ||| || |||||||| |||||| Sbjct 160 GATGTTGAGCGATTGGCTCTGGTCGATGAACGCTCCCCTGTCGGCGGCCATCTTGATGAT 101 Query 243934 GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCC 243993 | |||||| || ||||| || | |||||||||| | |||||| | ||||| | || Sbjct 100 GGTCTTCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGAGATCGTCGGGAATACC 41 Query 243994 TTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGG 244033 ||||| | ||| || || ||| ||| |||||| |||| Sbjct 40 GTCGATATCCTGGACGGAACCCCCGTGAGCGATGATCTGG 1 >seq261774 Length=254 Score = 100 bits (110), Expect = 5e-16 Identities = 175/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 244739 GTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAG 244798 ||||||||||| ||||| || ||||| || | ||| || || ||||| | |||||| Sbjct 3 GTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAA 62 Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTC 244858 ||||| ||||| |||||| | ||| ||||| |||| ||||| ||| || | || | Sbjct 63 GCGTCTTTGTACAGCATGTATGGCGTTCCGGTTTCGACCTGGGATTCGATGATGGCGTAC 122 Query 244859 CAGAGGTCCCTAGCCTTGACCGTCCT-GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTA 244917 || || | || |||||| || | ||| ||| || || | |||||| |||||| Sbjct 123 CACAGCTGTTGGGCTTTGACCTTCTTCACGA-ACTTTCCTTCCGACTCGTACTTGGTGTA 181 Query 244918 CAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACAT 244977 || | |||| ||||| ||||| ||| | || ||||| || ||| ||||| Sbjct 182 GAGTTTCACGAATTCGGGTCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACACAT 241 Query 244978 GAGACTCCACTC 244989 |||||||| || Sbjct 242 CAGACTCCAATC 253 >seq261775 Length=254 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 244739 GTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAG 244798 ||||||||||| ||||| || ||||| || | ||| || || ||||| | |||||| Sbjct 3 GTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAC 62 Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTC 244858 ||||| ||||| |||||| | ||| ||||| |||| ||| | ||| || | || | Sbjct 63 GCGTCTTTGTACAGCATGTATGGCGTTCCGGTTTCGACCTGCGACTCGATGATGGCGTAC 122 Query 244859 CAGAGGTCCCTAGCCTTGACCGTCCT-GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTA 244917 || || | || ||||| || | ||| ||| || || | |||||| |||||| Sbjct 123 CACAGCTGTTGGGCTCTGACCTTCTTCACGA-ACTTTCCTTCCGACTCGTACTTGGTGTA 181 Query 244918 CAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACAT 244977 || | |||| ||||| ||||| ||| | || ||||| || ||| ||||| Sbjct 182 GAGTTTCACGAAGTCGGGTCCCCAACAGTCGGCAAGACCGGGACAATCGTGCGGACACAT 241 Query 244978 GAGACTCCACTC 244989 |||||||| || Sbjct 242 CAGACTCCAATC 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929958413122480