Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1033248 113 1e-19 seq1119540 105 2e-17 seq1030155 96.9 8e-15 >seq1033248 Length=572 Score = 113 bits (124), Expect = 1e-19 Identities = 221/321 (69%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 ||||||||| | || || |||| ||||| || ||||| || ||||| |||| |||| Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACTACT 295 Query 72477 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 || ||||| || || ||||||| |||| || ||| | ||||| |||||||| Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATAGTCGT 236 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||||||||| | || |||||| | ||| ||| || ||||||||||| || Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGAAAG 176 Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 72655 ||| | ||||| | ||||||||||| || |||||| || ||||| || | Sbjct 175 TCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116 Query 72656 CAATGG---TGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 72712 | || | | || | | || | || |||||| | ||| | |||||||| ||||| Sbjct 115 CCTAGGGCTTATTGATTA--TCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGG 59 Query 72713 ATATGCGAAGGATTACGTAGA 72733 |||| | |||||| ||||| Sbjct 58 TCATGCCAGGGATTATGTAGA 38 >seq1119540 Length=600 Score = 105 bits (116), Expect = 2e-17 Identities = 218/319 (68%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 ||||||||| | || || |||| ||||| || ||||| || ||||| |||| ||| Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACTACC 295 Query 72477 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 || ||||| || || ||||||| |||| || ||| | ||||| || ||||| Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTACTGGATAGTCGT 236 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595 || ||||||||| | || |||||| | ||| ||| || ||||| ||||| || Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGAAAG 176 Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATAT-TT 72654 ||| | ||||| | ||||||||||| || |||||| || ||||| || | Sbjct 175 TCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116 Query 72655 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 72714 || | || | | | | || | || |||||| | ||| | |||||||| ||||| Sbjct 115 TCTAGGGCTTATTGATTTTCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGGTC 57 Query 72715 ATGCGAAGGATTACGTAGA 72733 |||| | |||||| ||||| Sbjct 56 ATGCCAGGGATTATGTAGA 38 >seq1030155 Length=683 Score = 96.9 bits (106), Expect = 8e-15 Identities = 144/203 (71%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || || | |||| || || || || || || || |||| | Sbjct 477 CCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAG 536 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | |||||| || ||||||||||| | |||||| |||||| Sbjct 537 AGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTG---GTCTGGG 593 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 |||||||| || || || || || |||||||| || || || | || | || Sbjct 594 GGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCA 653 Query 288424 ACTTCGAGCGTGATCGTCTTCCC 288446 ||||| || ||||| ||||| || Sbjct 654 ACTTCAAGAGTGATGGTCTTTCC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161241029594094