Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1033248 113 1e-19
seq1119540 105 2e-17
seq1030155 96.9 8e-15
>seq1033248
Length=572
Score = 113 bits (124), Expect = 1e-19
Identities = 221/321 (69%), Gaps = 8/321 (2%)
Strand=Plus/Minus
Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476
||||||||| | || || |||| ||||| || ||||| || ||||| |||| ||||
Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACTACT 295
Query 72477 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
|| ||||| || || ||||||| |||| || ||| | ||||| ||||||||
Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATAGTCGT 236
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595
|| ||||||||| | || |||||| | ||| ||| || ||||||||||| ||
Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGAAAG 176
Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 72655
||| | ||||| | ||||||||||| || |||||| || ||||| || |
Sbjct 175 TCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116
Query 72656 CAATGG---TGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 72712
| || | | || | | || | || |||||| | ||| | |||||||| |||||
Sbjct 115 CCTAGGGCTTATTGATTA--TCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGG 59
Query 72713 ATATGCGAAGGATTACGTAGA 72733
|||| | |||||| |||||
Sbjct 58 TCATGCCAGGGATTATGTAGA 38
>seq1119540
Length=600
Score = 105 bits (116), Expect = 2e-17
Identities = 218/319 (68%), Gaps = 4/319 (1%)
Strand=Plus/Minus
Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476
||||||||| | || || |||| ||||| || ||||| || ||||| |||| |||
Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACTACC 295
Query 72477 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
|| ||||| || || ||||||| |||| || ||| | ||||| || |||||
Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTACTGGATAGTCGT 236
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 72595
|| ||||||||| | || |||||| | ||| ||| || ||||| ||||| ||
Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGAAAG 176
Query 72596 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATAT-TT 72654
||| | ||||| | ||||||||||| || |||||| || ||||| || |
Sbjct 175 TCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116
Query 72655 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 72714
|| | || | | | | || | || |||||| | ||| | |||||||| |||||
Sbjct 115 TCTAGGGCTTATTGATTTTCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGGTC 57
Query 72715 ATGCGAAGGATTACGTAGA 72733
|||| | |||||| |||||
Sbjct 56 ATGCCAGGGATTATGTAGA 38
>seq1030155
Length=683
Score = 96.9 bits (106), Expect = 8e-15
Identities = 144/203 (71%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| || || | |||| || || || || || || || |||| |
Sbjct 477 CCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAG 536
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | |||||| || ||||||||||| | |||||| ||||||
Sbjct 537 AGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTG---GTCTGGG 593
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|||||||| || || || || || |||||||| || || || | || | ||
Sbjct 594 GGAATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCA 653
Query 288424 ACTTCGAGCGTGATCGTCTTCCC 288446
||||| || ||||| ||||| ||
Sbjct 654 ACTTCAAGAGTGATGGTCTTTCC 676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1161241029594094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |