Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1033248 113 1e-19 seq1119540 105 1e-17 >seq1033248 Length=572 Score = 113 bits (124), Expect = 1e-19 Identities = 221/321 (69%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 68406 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 68465 ||||||||| | || || |||| ||||| || ||||| || ||||| |||| |||| Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACAGAAACTACT 295 Query 68466 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || ||||| || || ||||||| |||| || ||| | ||||| |||||||| Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTATTGGATAGTCGT 236 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||||||| | || |||||| | ||| ||| || ||||||||||| || Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAATCACGAAAG 176 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644 ||| | ||||| | ||||||||||| || |||||| || ||||| || | Sbjct 175 TCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116 Query 68645 CAATGG---TGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGG 68701 | || | | || | | || | || |||||| | ||| | |||||||| ||||| Sbjct 115 CCTAGGGCTTATTGATTA--TCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGG 59 Query 68702 ATATGCGAAGGATTACGTAGA 68722 |||| | |||||| ||||| Sbjct 58 TCATGCCAGGGATTATGTAGA 38 >seq1119540 Length=600 Score = 105 bits (116), Expect = 1e-17 Identities = 218/319 (68%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 68406 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 68465 ||||||||| | || || |||| ||||| || ||||| || ||||| |||| ||| Sbjct 354 CAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCACAGACAGAAACTACC 295 Query 68466 CCGTTTTATCCTCGAAGCCCTTACG-GTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || ||||| || || ||||||| |||| || ||| | ||||| || ||||| Sbjct 294 CCCTTTTACCCGCGGTCACCTTACGCGTGT-GCCAAGCTCTACGCGTACTGGATAGTCGT 236 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || ||||||||| | || |||||| | ||| ||| || ||||| ||||| || Sbjct 235 TAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAACCACGAAAG 176 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATAT-TT 68643 ||| | ||||| | ||||||||||| || |||||| || ||||| || | Sbjct 175 TCCGAGAAGAGGGGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCGAAAATCGT 116 Query 68644 TCAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGAT 68703 || | || | | | | || | || |||||| | ||| | |||||||| ||||| Sbjct 115 TCTAGGGCTTATTGATTTTCTTG-AACTTGGTAATCTGGATTCGAAAAGAGACTGGGGTC 57 Query 68704 ATGCGAAGGATTACGTAGA 68722 |||| | |||||| ||||| Sbjct 56 ATGCCAGGGATTATGTAGA 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1085665010632550