Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1030155 109 5e-19 seq261774 84.2 2e-11 >seq1030155 Length=683 Score = 109 bits (120), Expect = 5e-19 Identities = 147/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||| || || | |||| || || || || |||||||||||||| | Sbjct 476 ACCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 535 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || |||||||||| || |||||||| | || |||| ||| ||||| || || Sbjct 536 GAGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGG 595 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || ||||| | | || ||||| ||| ||| | || || ||| || | Sbjct 596 AATTCCTTCCTTGTCTTG-AATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAA 654 Query 64395 CTTCTACAGTTACGGTCTTGCC 64416 |||| | ||| | |||||| || Sbjct 655 CTTCAAGAGTGATGGTCTTTCC 676 >seq261774 Length=254 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 154650 TTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGA-TTTGATGTTGCATGCGTCTTT 154708 || ||||| ||||| ||||| || || | ||| ||||| ||||| |||||| |||||||| Sbjct 12 TTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGA-GTTGCAAGCGTCTTT 70 Query 154709 GTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAAT 154753 ||||| ||||| || || || ||||| || |||| ||| || || Sbjct 71 GTACAGCATGTATGGCGTTCCGGTTTCGACCTGGGATTCGATGAT 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492036002882120