Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1055522 161 1e-34 seq1002630 100 3e-16 >seq1055522 Length=411 Score = 161 bits (178), Expect = 1e-34 Identities = 234/328 (71%), Gaps = 2/328 (1%) Strand=Plus/Minus Query 94057 CGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATG 94116 ||||||| |||| ||||||| ||| ||||| |||| |||||||| | || |||||| Sbjct 332 CGTGCCAAGGGTAGCTACATCGCCGGCACCAACGGCATATCCAACGGTATAGTTCCTATG 273 Query 94117 CTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGT 94176 | || |||| ||||||| | || || ||||| ||||| || || | | | || Sbjct 272 TTGCGCGTCTACAACAACACAGCACGTTACGTCGACCAAGGCGGCAACAAGCGCCCCGGC 213 Query 94177 TCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGA 94236 | ||||| ||||||| || ||||||||||||||||| | ||| |||| || | | Sbjct 212 GCGTTCGCAATCTATCTGGAACCCTGGCACGCGGACGTCTTCGAATTCCTCGATCT-CAA 154 Query 94237 AAGAACCACGG-CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCC 94295 | || ||||| ||| || | | ||||| ||| | |||||||| |||||| | || Sbjct 153 GAAAAACACGGGCAAGGAGGAAGTTCGAGCCAGGGACTTGTTCTACGCCCTCTGGATTCC 94 Query 94296 AGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA 94355 ||||| || ||| | ||||||||||| ||| | |||||||| | ||||| | || Sbjct 93 CGACCTGTTCATGGAGCGCGTCGAGAAGAACCTGGATTGGAGTCTGATGTGTCCGCACGA 34 Query 94356 ATGTCCCGGACTGTCCGACGTTTGTGGA 94383 |||||||| || ||||| ||| ||| Sbjct 33 TTGTCCCGGTCTTGCCGACTGTTGGGGA 6 >seq1002630 Length=654 Score = 100 bits (110), Expect = 3e-16 Identities = 431/674 (64%), Gaps = 27/674 (4%) Strand=Plus/Minus Query 94524 CAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGA 94583 |||| | ||||| ||||||||| | ||||| ||| || || || ||||| || Sbjct 653 CAACTCAAAGTCGAACCAGCAGAATCTCGGCACGATTCGTTGCAGCAACCTCTGCACGGA 594 Query 94584 GATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCT 94643 ||||||||||| ||||| ||||| ||| | || || || ||||| | ||| ||| | Sbjct 593 GATTGTCGAGTTCACTTCGCCGGAAGAGGTGGCCGTTTGCAACCTCGCCTCGATCGCC-- 536 Query 94644 GTCCACTTTCGTGCGAGATGCCTA-CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTG 94702 ||| || | || | | || | || | | ||||||| | ||| |||| Sbjct 535 GTCAACAT--GTACATCAAACCGAACAAGAC---------GTTCGATTTCGAGAAGCTCA 487 Query 94703 TGAACTTCGCGGGAAGGATGGTCTTGAA---CCTGAACAGGGTAATCGACAAGAACTTCT 94759 | | || || | || ||| ||| ||| || | | |||||| ||||||| Sbjct 486 AGGAGGTCACG---AAGACCGTCACGAAAAACCTTAATAAAATCATCGACGTCAACTTCT 430 Query 94760 ACCCCGTCCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCC 94819 |||| | || |||||| ||| ||| ||| || ||||| |||||||| |||||| ||| Sbjct 429 ACCCGATTCCCGAGGCGAAGACCTCGAACATGCGTCATCGACCCATCGGTATCGGCATCC 370 Query 94820 AGGGTTTCGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGG 94879 ||||| ||||||| | | |||||||| || | ||| | || || | Sbjct 369 AGGGTCTCGCGGATCTCTTCATCCTGATGCGTTATCCGTTCGAGAGCGAAGAAGCTCAGA 310 Query 94880 GTTTGAATTTGAACATATTCGAAAGCATTTATTACGGGGCCATGAAA-CAATCCGTCCAC 94938 | || | | || || |||| || |||||||| || || || | | | | || Sbjct 309 AACTCAACGTCCAGATCTTTGAAACAATCTATTACGGCGCTTTGGAAGCGAGCTGCGAAC 250 Query 94939 TTGGCCAGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGC 94998 | | | ||| | | || ||| || ||| | |||| || | |||| Sbjct 249 TCGCCGAGAAAGAA----GGCCCATACTCTACGTACGAAGGATGTCCGGTCAGCAAGGGG 194 Query 94999 ATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTA 95058 ||| | |||| |||| | ||| || | ||| | ||| | || |||| ||| || Sbjct 193 ATTCTACAGTACGACATGTGGAACGTAACCCCCACCAATCTCTGGGATTGGGCAGCACTC 134 Query 95059 CGCGCTGATGTTATCAAA-CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCAC 95117 ||| | | | || | ||||| || || | || || | || ||||||||||| Sbjct 133 AAGGCTAA-GATCGCACAGCACGGCGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCAC 75 Query 95118 GGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGT 95177 ||| ||||| || |||||||| ||||| ||||| || |||||||| | ||| |||||| | Sbjct 74 GGCTTCCACCGCTCAGATCCTCGGCAATAACGAATCCTTCGAACCGTACACTTCCAACAT 15 Query 95178 GTACAACAGGCGGG 95191 |||| | | |||| Sbjct 14 CTACACCCGCCGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487189351037080