Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq1104132 82.4 6e-11 seq257008 82.4 6e-11 >seq1104132 Length=623 Score = 82.4 bits (90), Expect = 6e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 || || | |||||||| |||||||||||||||||||| ||||||| || |||||||| | Sbjct 471 TGTCTATGGGCGAGGGTTGGCACAACTACCACCACGTCTTCCCCTGGGATTACAAGGCTG 530 Query 108941 CCGAGTTGGGGAACGACT 108958 | ||| ||||| || ||| Sbjct 531 CGGAGCTGGGGGACTACT 548 >seq257008 Length=253 Score = 82.4 bits (90), Expect = 6e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 108879 GTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGC 108938 |||| || | |||||||| |||||||||||||||||||| ||||||| || |||||||| Sbjct 99 GTTGTCTATGGGCGAGGGTTGGCACAACTACCACCACGTCTTCCCCTGGGATTACAAGGC 158 Query 108939 CGCCGAGTTGGGGAACGACT 108958 || ||| |||| || ||| Sbjct 159 TGCAGAGCTGGGTGACTACT 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 376104351162312