Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1002630 172 5e-38 seq1055522 87.8 2e-12 seq985049 87.8 2e-12 >seq1002630 Length=654 Score = 172 bits (190), Expect = 5e-38 Identities = 406/600 (68%), Gaps = 15/600 (3%) Strand=Plus/Plus Query 153080 AGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCAT 153139 |||| | ||||| ||||||||||||||||| || || ||||| |||| || || ||||| Sbjct 23 AGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGAAGCCGTGGGCAT 82 Query 153140 GTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTG 153199 | || | | | ||||| || | ||||||| | || | |||| | || Sbjct 83 GGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGCCTTGAGTGCTGC 142 Query 153200 CCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACA-CTCCTCGAC 153258 ||||||||| || | || || ||||||||||||||||||||| | | ||| | | Sbjct 143 CCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTACTGTAGAATCCCCTTG-C 201 Query 153259 TGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAG 153318 || | |||| || | ||||| ||| ||| || | ||| ||||||||||| | Sbjct 202 TGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTCTCGGCGAGTTCGCAGCTCG 261 Query 153319 CCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTT 153378 | || | ||||| || || || ||||| ||| || ||||| ||||||| Sbjct 262 CTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTGAGTTTCTGAGCTTCTT 321 Query 153379 CGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGC 153438 |||||||| |||| |||| ||| | ||| || || ||||||||||| |||| | Sbjct 322 CGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGACCCTGGATGCCGATAC 381 Query 153439 CGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGA 153497 ||||||||||||| | ||| | | |||| ||| | || || ||| ||| Sbjct 382 CGATGGGTCGATGACGCATGTTCGAGGTCTTCGC-CTCGGGAATCGGGTAGAAGTTGACG 440 Query 153498 TCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAA 153557 ||||| ||||| || ||||| | || || || | | |||| || ||||||||| Sbjct 441 TCGATGATTTTATTAAGGTTTTTCGTGACGGTCTTCGTGACCTCCTTGAGCTTCTCGAAA 500 Query 153558 TCATAGGTCAT-TTCG--TCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTA 153614 || | ||| | |||| | || ||| ||| || ||||| || || || || || Sbjct 501 TCGAACGTCTTGTTCGGTTTGA--TGTA--CAT--GTTGACGGCGATCGAGGCGAGGTTG 554 Query 153615 CAGACGGCCGTCTCTT-CGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCA 153673 || |||||| ||||| ||||| | || ||| || ||||| | ||||||||||||||| Sbjct 555 CAAACGGCCACCTCTTCCGGCGAAG-TGAACTCGACAATCTCCGTGCAGAGGTTGCTGCA 613 >seq1055522 Length=411 Score = 87.8 bits (96), Expect = 2e-12 Identities = 201/296 (68%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 153861 CAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACAT--ATCGTCGGCGT 153918 |||||||| || |||||||| | |||||||||||||| ||| || | || | | Sbjct 13 CAGTCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCA-ATCCAGGTTCTTC-T 70 Query 153919 TGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGC 153978 |||||| ||||||||| || || | |||||| ||||| | | ||| | | || | Sbjct 71 CGACGCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTC-CCTGGCTCGA 129 Query 153979 A-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAG 154037 | |||||| |||| |||| || |||| ||| | ||| ||| ||||||||| Sbjct 130 ACTTCCTCCTTGCCCGTGTTTTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAG 189 Query 154038 GGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGC 154094 ||||| | |||| || | || || ||| || ||||| || ||||||| || Sbjct 190 GGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGT 249 Query 154095 ACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT 154150 | | |||||| ||||||||| ||| || | | ||| | | |||||||||| Sbjct 250 GCTGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGT 305 >seq985049 Length=630 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| || || || | |||| |||||||| |||||||||||| Sbjct 345 GCCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGA 404 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||||| || || | || ||||| | |||| | |||||||||||| || || Sbjct 405 CAAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGG 464 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| || || | | || | || |||| | || || Sbjct 465 GATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTAC 524 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || || ||||| || ||||||||||| Sbjct 525 TTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488705111464560