Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1002630 120 3e-22 seq985049 100 3e-16 >seq1002630 Length=654 Score = 120 bits (132), Expect = 3e-22 Identities = 193/273 (71%), Gaps = 12/273 (4%) Strand=Plus/Minus Query 124005 GAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCG 124064 |||||||| ||||||||||||||||| |||||||||||||| || | | | ||| | Sbjct 289 GAAACAATCTATTACGGCGCTTTGGAAGCGAGCTGCGAACTCGCCGAGAAAGAAGGCCCA 230 Query 124065 TACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAAT 124124 ||| | |||| || | |||| ||| || ||| | ||||||||||||||||| Sbjct 229 TACTCTACGTACGAAGGATGTCCGGTCAGCAAGGGGATTCTACAGTACGACATGTGGAAC 170 Query 124125 GCTACACCGACAAATTTGTGGGACTGG--AGCGTTTTAAAACAACGC--ATATCG-AC-G 124178 | || || || ||| | ||||| ||| ||| | ||| || | |||| || | Sbjct 169 GTAACCCCCACCAATCTCTGGGATTGGGCAGC------ACTCAAGGCTAAGATCGCACAG 116 Query 124179 CACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATT 124238 ||||| | ||||| || || | | || |||||| ||||| |||| ||||| || Sbjct 115 CACGGCGTTCGTAATTCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTCAGATC 56 Query 124239 TTAGGAAACAACGAATCCTTCGAGCCGTTCACT 124271 | || || |||||||||||||| |||| |||| Sbjct 55 CTCGGCAATAACGAATCCTTCGAACCGTACACT 23 >seq985049 Length=630 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || ||||||||||||||||| || || ||| | ||| ||| ||||| || Sbjct 370 TGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCATCTTCCAACTGC 429 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||| || || ||||| || || ||||| ||||| ||||| || || Sbjct 430 TTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTC 489 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| || | || ||||||| || ||||| || |||| ||||| || || Sbjct 490 GCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAATGGTTTTACCCGTG 549 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || ||||| ||||| Sbjct 550 AGGGTTTTCACGAAAATCTGCAT 572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445119908819080