Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq277695 131 3e-25 seq1211838 111 2e-19 seq1002630 95.1 2e-14 >seq277695 Length=258 Score = 131 bits (144), Expect = 3e-25 Identities = 135/177 (76%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || || ||||| || ||||| | || ||||||| || | | |||||| |||| |||| Sbjct 246 AGGTAATACATCCCCGTCTTCAATCCGGACTGCCACGCGAAAAAGTGCATCGAAGTCAGT 187 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 || | ||| || | ||| ||||| ||||| || || ||||| ||||||||||| | Sbjct 186 TTCCCGTAGTTTGGTTTGGCGATGTGGATGTTGAGCGATTGGCTCTGGTCGATGAACGCT 127 Query 204005 GCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 ||| || |||||||| ||||| ||||||||||| || ||||||||||| |||||| Sbjct 126 CCCCTGTCGGCGGCCATCTTGATGATGGTCTTCTGGGAGATCTCCCACACGGTCTTG 70 >seq1211838 Length=1880 Score = 111 bits (122), Expect = 2e-19 Identities = 164/229 (72%), Gaps = 5/229 (2%) Strand=Plus/Minus Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275 |||||| || | |||||||| || || || ||||| || ||||||| | |||||| Sbjct 376 GTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAACCGTAGAAACACCGCGCCTC 317 Query 160276 CAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGG 160334 | | || |||||| ||||| |||||| || | ||||| | || || | ||||| | Sbjct 316 C-GTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTCTCGTTGACGATTCCGTCCG 258 Query 160335 CGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCT 160394 || |||||||| ||||||||||| ||||||||||| ||||| | | ||||| | Sbjct 257 ATGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTCTCTCCATCTTTGAGGGCC- 199 Query 160395 TTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 |||||||| | || ||| | || | || |||||||| || |||| Sbjct 198 --TCCCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCTGTCCA 152 >seq1002630 Length=654 Score = 95.1 bits (104), Expect = 2e-14 Identities = 204/302 (68%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 204221 CGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCG 204280 |||||| | | |||| ||| | |||||||| | ||||| ||||||| ||||||||| Sbjct 6 CGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCG 65 Query 204281 GTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACC 204340 ||| ||||||||||||||||| ||||| ||||| || || || |||| | | || | Sbjct 66 GTGGAAGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATC 125 Query 204341 CTGCGCTTCAGAGAGGTCCAGTC---GTGCATCGCACTGGGTTTCACGCCCCACATGTCG 204397 | ||| || | | ||| || | | || | |||| | ||| |||||||||| Sbjct 126 TTAGCCTTGAGTGCTGCCCAATCCCAGAG-ATTG--GTGGGGGTTACGTTCCACATGTCG 182 Query 204398 AACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCT 204457 |||| | || || | ||||| || | || | |||||| | || || || | Sbjct 183 TACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTTC 242 Query 204458 TCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACG 204517 || || || | ||| || ||| ||| || || || || ||||||||||| ||| Sbjct 243 TCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACG 302 Query 204518 TT 204519 || Sbjct 303 TT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783046248612880