Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq985049 140 8e-28 seq1030155 89.7 1e-12 >seq985049 Length=630 Score = 140 bits (154), Expect = 8e-28 Identities = 168/228 (74%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||| | |||||| || || |||||||||| ||||||||| | ||| || Sbjct 352 CGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAGTCGGACAAGGTA 411 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| |||||| || |||||||| | |||||| ||||| || || || Sbjct 412 CGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCC 471 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||| || |||| || || | | |||||| || | Sbjct 472 TCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGG 531 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTA 199636 || || || ||||||||||| |||||||| ||||| || ||||||| Sbjct 532 GTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTG---CATTTTA 576 >seq1030155 Length=683 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| || || | ||| || || |||||||| || | |||||| || | | ||| Sbjct 483 CGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGTT 542 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || || || ||||||||||| || | ||| ||||| || ||||||| Sbjct 543 CGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCT 602 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||||| || | |||||| | | || || || | Sbjct 603 TCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAACTTCAAGA 662 Query 199589 GTGATCGTCTTACC 199602 ||||| ||||| || Sbjct 663 GTGATGGTCTTTCC 676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1160519667959291