Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1211838 192 6e-44 seq985049 129 6e-25 seq1170154 96.9 3e-15 >seq1211838 Length=1880 Score = 192 bits (212), Expect = 6e-44 Identities = 235/321 (73%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 ||||| || || || || |||||||| || || || || ||||| || ||||||||||| Sbjct 375 TACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAACCGTAGAAACACCGCGCCTCC 316 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 | ||||||||| || ||| || || || ||||| ||||||||||| ||||| Sbjct 315 GTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTCTCGTTGACGATTCCGTCCGAT 256 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 ||||| || ||||||| ||||||| ||||||||| | ||| || || | | |||| Sbjct 255 GCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTCTCTCCATCTTTGAGGGCCTCC 196 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428 |||| | |||||||||| ||||| ||||| || | ||||| || || || || || Sbjct 195 CAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCTGTCCAGAATGAGGCTTCTGCC 136 Query 133429 TTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGG 133488 || |||||||| ||| ||||| || || || || || ||||| || |||||||| Sbjct 135 TTCTTGTACATCAGCCAGATGTCATGGTACTGGATAGGGAAGATCACGAAGCGGCGGGGA 76 Query 133489 TTTTCGCGCAACAGCGGCTCC 133509 |||||||| | || || ||| Sbjct 75 TTTTCGCGGAGGAGAGGTTCC 55 >seq985049 Length=630 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||| |||||||| |||||||| ||| | || || || || Sbjct 575 AAAATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCT 516 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||| | | | | | || | || |||| ||||||||||| || || | ||| Sbjct 515 TCCGATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGAC 456 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| | || | ||| || || ||| |||| || | || ||| | ||||||| Sbjct 455 CAACAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTAC 396 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||||| | || || || ||||| |||||| Sbjct 395 AACATCCAAAAGGAATCAACACTCCACTTGGTCCTGCGT 357 >seq1170154 Length=949 Score = 96.9 bits (106), Expect = 3e-15 Identities = 122/165 (74%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 132937 TCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCG 132996 ||||||||||| || | ||| |||||||| || ||||| || | ||| || |||||||| Sbjct 165 TCGTTGCTGAATGTGAGGCCAGGCATGAGTCCACGTTTCTTCAACCAGAAAATGGCGGCA 106 Query 132997 AAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAAC 133056 ||||| || || ||||||| |||||||| || || || || | | | |||||| || Sbjct 105 AAACTACCGGAGAAGAAGATACCCTCGACTGCAGCAAATGCAATGATTCTCTCGCCAAAG 46 Query 133057 GTGGCTTCTTTGCTGGC-GATCCAGCGCAGCGCCCATTCGGCCTT 133100 | || || | || | |||||| | || ||||| |||||||| Sbjct 45 GATGC-ACTCTCGTGACAGATCCACTGAAGAGCCCAGTCGGCCTT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492555962280320