Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1135001 196 6e-45 seq1029433 154 2e-32 seq747296 132 6e-26 seq1215171 122 1e-22 seq1005753 114 2e-20 seq979815 114 2e-20 seq1033248 102 1e-16 seq275625 100 4e-16 seq778093 93.3 5e-14 seq363367 87.8 2e-12 seq763183 84.2 3e-11 >seq1135001 Length=876 Score = 196 bits (216), Expect = 6e-45 Identities = 437/650 (67%), Gaps = 17/650 (3%) Strand=Plus/Minus Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287 |||||||||||| ||||| ||||| || || || || || | | ||||| || || Sbjct 739 GAACAAGTCCATGCACAGCTCCTCGAAGCGAGCCCGAGTGACCTTCGCGTAGAAGTCGAC 680 Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTT--GTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || | | | | || |||| | || || | ||| ||| Sbjct 679 GCCTTCGTGCAGAGCGTCGATCTCCAGGCTGGCTTCGGTGC--TTGACGAGAGCGTCCGC 622 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || |||||||| |||||||| | | ||||| | || |||| ||| ||| || ||| Sbjct 621 TTGGCGCGCTCGCACGCCGTCCTCAGCCGACGCAACGCGCGCGTGTTGCCGCGAAGATCC 562 Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAG----TGTCGAAGGAGTCTCGAATCGAA 7461 ||||| ||||| || || ||||| || | |||| || ||| || | | || || Sbjct 561 TTCTTGTGTTTCCGCTTGAACTCGTCCGCGAAGAAGGTGACGA--GACGGTTG--TCAAA 506 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GATACCTC 7517 || || || || | ||| || || || || |||| ||||| ||||| || |||| Sbjct 505 GTCCTCCCCGCCGAGGTGGGTGTCTCCGGCCGTCGACTTGACCTCAAACAGCGAGCCCTC 446 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | | || | | || || || || || || || || ||||| || || | |||| Sbjct 445 GCTGA-TGGCGAGGACGGACACGTCGAAGGTTCCGCCTCCTAGGTCGAAGATCAAGACGT 387 Query 7578 TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | ||| || |||||| ||||| ||||| |||| || || || || || || | Sbjct 386 TCTTCTCGCCGGTGAGGTTCTTGTCGAGGCCGTATGCGAGGGCGGCAGCGGTCGGCTCGT 327 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || ||||| ||| || || | |||| || || ||||| || || | Sbjct 326 TGATGATGCGGAGGACGTTCATGCCGGCGATGGCGCCCGCGTCCTTGGTCGCCTGGCGCT 267 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| ||||||||||| ||||| | ||| | ||| || ||||| || || | Sbjct 266 GGGAGTCGTTGAAGTAGGCCGGCACCGTGATGACGGAGTCGGTAACTTTGCCCCCCAGGT 207 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 | | || ||||| || |||| || || || |||||||| |||||||| | ||| | Sbjct 206 ATGTCTCGGCGATCTCCCTCATCTTCGTGAGCACCATCGAGCTGATCTCTTCGGGCGCGA 147 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCA 7867 || || || || || || | || || | ||| |||| || ||||| Sbjct 146 ACGTCTTGGTCTCGCCCTTGTACTCCACCTGGATCTTGGGCTTGCCCGCA 97 >seq1029433 Length=693 Score = 154 bits (170), Expect = 2e-32 Identities = 364/547 (67%), Gaps = 6/547 (1%) Strand=Plus/Plus Query 7602 CGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGC 7661 |||| ||||| || | ||||| || || || || || || || || || ||| || | Sbjct 1 CGAGGCCGTAGGCCAGCGCCGCGGCGGTCGGCTCGTTGATGATGCGGAGGACGTTGAGCC 60 Query 7662 CAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGA 7721 | || || |||| || || ||||| || || || || ||||| |||||||| || | Sbjct 61 CCGCGATCACCCCCGCGTCCTTGGTCGCCTGACGCTGGGAGTCGTTGAAGTAGGCGGGTA 120 Query 7722 CCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTT 7781 | || | ||| |||||| | || || ||||||| || || | || ||||| | Sbjct 121 CGGTGATGACGGCGTCCCTCACGACGCCCCCCAGATACGCCTCGGCCGTCTCCTTCATCT 180 Query 7782 TGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAAT 7841 | || | |||||||| ||||| || || | ||| | ||||| || || || | Sbjct 181 TCGTCAACACCATCGAGCTGATCTCCTCGGCTGAGAACCGCTTCGTCTCCCCCTTCGCCT 240 Query 7842 CAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCA 7901 | | | ||| |||| || || | | || || ||||| ||| ||||| |||| Sbjct 241 CCGCCTGGATCTTGGGCTTG-CCTCCGT--CGTCGACGACCTTGAACGGCCAATGCTTCA 297 Query 7902 TATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA 7961 | || || || || ||| || || || || |||||||| || || || | Sbjct 298 TGTCCTCCGCGATCTTGGCGTCGTCGAAGCGTCGCCCAATCAGACGCTTCGCGTCGAACA 357 Query 7962 CTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCAT 8021 | ||||| || |||||||| |||||||| || ||||| || || |||||||| Sbjct 358 CCGTGTTCAACGGATTCATGGCCACCTGGTTCTTGGCGGCGTCACCTATCAGACGTTCCG 417 Query 8022 TATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAA 8081 | | |||| |||||||| || || || ||||| || ||||||||||| ||||| | Sbjct 418 TGT---CCGTGAACGCGACATAGCTCGGCGTTGTTCGGTTACCTTGGTCGTTGGCAATGA 474 Query 8082 TTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATAC 8141 | || || | | | ||| |||| || |||||||| ||||| || || | || || | Sbjct 475 TCTCAACCTTGCCCTGTTGATAGACCCCCACGCACGAGTACGTGGTCCCCAGGTCGATGC 534 Query 8142 CGATTGC 8148 |||| || Sbjct 535 CGATAGC 541 >seq747296 Length=445 Score = 132 bits (146), Expect = 6e-26 Identities = 249/362 (69%), Gaps = 13/362 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA----GA 7511 |||||| || || || |||| ||| || ||||| ||||||| || || || || Sbjct 84 ATCGAAGTCCTCCCCGCCCAGGTGGGTGTCCCCGGCGGTCGAGCGCACCTCGAACAACGA 143 Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571 |||| | | ||| | | | || || || || || ||||| |||||||| || || | Sbjct 144 GCCCTCGT-CGATGGTCAGGATGGACACGTCGAATGTCCCACCGCCCAGGTCGAAGATTA 202 Query 7572 GTACGTTCGTATCG-TCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 | ||||| ||| || | ||| ||||| ||||| ||||| || | ||||| ||| Sbjct 203 GCACGTT----TCGCTCACCCTTGAGGTTCTTGTCGAGGCCGTAGGCCAGCGCCGCGGCC 258 Query 7628 GTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 || || || || || || || || ||| || || || || | | | || || || ||| Sbjct 259 GTCGGCTCGTTGATGATGCGGAGGACGTTGAGCCCGGCGATGGCTCCGGCGTCCTTGGTC 318 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTC 7747 ||||| || || || ||||| ||||||||||| ||||| | ||| |||||| | || Sbjct 319 GCTTGGCGCTGAGAGTCGTTGAAGTAGGCCGGCACCGTGATGACGGCGTCCCTCACGGCG 378 Query 7748 TTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCT 7807 || ||||||| || || | || ||||| ||||| | |||||||| |||||| Sbjct 379 CCCCCTAGATACGCCTCGGCCGTCTCCTTCATCTTGGTCAACACCATCGAGCTGATCTCT 438 Query 7808 TC 7809 || Sbjct 439 TC 440 >seq1215171 Length=2551 Score = 122 bits (134), Expect = 1e-22 Identities = 210/303 (69%), Gaps = 14/303 (5%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 || || || || || || || || | || || | || |||||| | ||| ||||| Sbjct 1864 GAGACGTCGAAAGTGCCGCCGCCTAAATCGAAGACCAGAACGTTCTTCTCGCCGTCTCG- 1806 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||| ||||||||||| ||||| ||||| || || || || || || || | || Sbjct 1805 --CTTGTCGAGACCGTAGGCGATGGCCGCAGCAGTCGGCTCGTTGATGATCCT----CAT 1752 Query 7655 TTC----AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710 | | || |||| || ||| | || || || || || ||||| || | ||||| || Sbjct 1751 TACCACGAGTCCAGAGATTGTTCCGGCGTCCTTTGTGGCCTGTCGCTGGGCGTCGTTGAA 1692 Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770 |||||| ||||||||||| || |||| ||| || ||||| || || || | |||||| | Sbjct 1691 GTAGGCGGGGACCGTTACCACGGCGTGCGTCACCTTCTTGCCCAGGTAAGCTTCCGCAGT 1632 Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 || ||||| ||| |||||||| | || ||||| || | |||||| || |||| Sbjct 1631 CTCCTTCATCTTGCCGAGAACCATGGCCGAGATCTCCTCGGGGGCAAAC---GTCTTTTC 1575 Query 7831 ACC 7833 ||| Sbjct 1574 ACC 1572 >seq1005753 Length=659 Score = 114 bits (126), Expect = 2e-20 Identities = 153/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || |||||||| || || || || ||||| ||||||||||| |||||||| Sbjct 496 CCAATCAGACGCTTCGCGTCGAACACCGTGTTCAACGGGTTCATGGCCACCTGGTTCTTA 437 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || ||||| || || ||||||||| | | | || |||||||| || || || ||| Sbjct 436 GCGGCGTCACCTATCAGACGTTCAGTGTCT---GTGAACGCGACATAACTCGGCGTTGTT 380 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || ||||||||||| ||||| || || || | | | ||| |||| || |||||| Sbjct 379 CGGTTACCTTGGTCGTTGGCAATGATCTCCACCTTGCCCTGTTGGTAGACCCCCACGCAC 320 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || ||||| || || | || || ||||| || Sbjct 319 GAGTACGTGGTCCCCAGGTCGATGCCGATGGC 288 >seq979815 Length=627 Score = 114 bits (126), Expect = 2e-20 Identities = 138/187 (74%), Gaps = 3/187 (2%) Strand=Plus/Minus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||| | ||| ||| | |||||||| || ||||| | || || ||||| || | | Sbjct 238 CAAAGATTGTATTTGTTGGGTTCATAGCCACCTGGTTTTGGGCTGCTTCCCCAATCAATC 179 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 |||| |||| |||| || || ||||| ||| || || ||||||||||||||||| | Sbjct 178 GTTCGTTAT---CCGTGAATGCCACGTAGCTTGGTGTTGTACGATTCCCTTGGTCGTTGG 122 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 |||||||||| || | | ||||| ||||||| || || ||||| || ||||| || | Sbjct 121 CAATAATTTCCACTTTGCCATTTTGAAAGACGCCAACACAAGAATATGTGGTTCCCAAGT 62 Query 8136 CAATACC 8142 |||| || Sbjct 61 CAATGCC 55 >seq1033248 Length=572 Score = 102 bits (112), Expect = 1e-16 Identities = 221/326 (68%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAAT 22500 || |||||||| || ||||| || || || ||||| || || |||| || || | Sbjct 363 AAGTTTTATCAAGCGTCTACTTCCGAACTGTACGGAAAGGTCGCCGAAATACCGCAGACA 304 Query 22501 GAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG 22560 |||| ||| || ||||||||||| ||||| || | | || || | | |||||| Sbjct 303 GAAACTACTCCCTTTTACCCGCGGTCACCTTACGCGTGTGCCAAGCTCTACGCGTATTGG 244 Query 22561 GCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAAC 22620 ||||| || | || |||||| ||||| ||||| || || || | ||||| Sbjct 243 ATAGTCGTTAACTACCGTGAGGCATACGACATGTTCGCATGTAACGGCATCCTCTTCAAT 184 Query 22621 CACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCT 22680 |||||| |||||| | ||||| | |||||||| || || || || | ||| || Sbjct 183 CACGAAAGTCCGAGAAGAGGTGAGAGTTTCGTGACTCGGAAGATCACGCGTTCTGTAGCG 124 Query 22681 AATATCAGTGC-AGG--TAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGA 22737 || ||| || | ||| | | | || || | |||||||| || ||| ||||| || Sbjct 123 AAAATC-GTCCTAGGGCTTATTGATTATCTT--GAACTTGGTAATCTGGATTCGAAAAGA 67 Query 22738 GATTGGGGTCATGCACGCGATTACGT 22763 || ||||||||||| | ||||| || Sbjct 66 GACTGGGGTCATGCCAGGGATTATGT 41 >seq275625 Length=259 Score = 100 bits (110), Expect = 4e-16 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| || ||||| || || || || ||||| | ||||||||||| |||||||| Sbjct 242 CCGATCAGCCGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCATGGCCACCTGGTTCTTA 183 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG-GTCGT 8055 || |||||||| || ||||| || | || | || ||||| || | |||| || || Sbjct 182 GCAGCGTCCCCTATCAGACGCTC---GGTGTCGTTGAAGGCGACATA-GCTGGGCGTTGT 127 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 ||| || ||||||||||| ||||| || || || | | | ||| | || || ||||| Sbjct 126 TCGGTTACCTTGGTCGTTGGCAATGATCTCCACTTTGCCCTGTTGGAACACCCCCACGCA 67 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || || || ||||| || Sbjct 66 TGAGTAGGTGGTACCCAAGTCGATGCCGATCGC 34 >seq778093 Length=463 Score = 93.3 bits (102), Expect = 5e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAG 7659 || || ||||| || || ||||||||||| || || || || || || ||||| |||||| Sbjct 330 TCCAGGCCGTAGGCAATGGCCGCCGCCGTCGGCTCGTTGATGATGCGCAAGAC-GTTCAG 388 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || ||||| | |||| || || ||||| || || ||||| ||||| ||||| || || Sbjct 389 ACCGGCAATGGCGCCCGCGTCCTTGGTCGCCTGACGCTGCGAGTCGTTGAAGTACGCGGG 448 Query 7720 GACCGTTACGACCGC 7734 ||||| || ||||| Sbjct 449 CACCGTCACCACCGC 463 >seq363367 Length=284 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || ||||| | ||||||||||| |||||||| Sbjct 116 CCGATCAGACGCTTGGCGTCGAACACCGTGTTCTGCGGGTTCATGGCCACCTGGTTCTTA 175 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || |||||||| || ||||| || | || | || ||||| || || || ||| Sbjct 176 GCAGCGTCCCCTATCAGACGCTC---GGTGTCGTTGAAGGCGACATAGCTCGGCGTTGTT 232 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 || || ||||||||||| ||||| || || || Sbjct 233 CGGTTACCTTGGTCGTTGGCAATGATCTCCAC 264 >seq763183 Length=452 Score = 84.2 bits (92), Expect = 3e-11 Identities = 162/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || ||||| || || || || || || || || || ||| ||| | || Sbjct 191 GTACGCTTCGCACGCTCGCAGGCGGTACGCAATCGTCGGAGCGCGCGCTTGTTGCTGGTC 250 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 | || ||||| | |||||| || ||||| | ||||| | | || || Sbjct 251 AGGTCCTTCTTGTATTTACGCTTGAACTCCTGGACAAAGTGGTTGACCATTCGGTTGTCA 310 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || ||||| | || || || || || |||| ||||| |||||||| || | Sbjct 311 AAGTCCTCCCCACCGAGATGCGTGTCACCGGCCGTCGACTTGACCTCAAAGATTCCATCC 370 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 || ||| | | | ||||||||||| ||||| || || || || ||||| |||||||| Sbjct 371 TCGATGGTCAGAATGGAAACATCAAAGGTACCGCCGCCGAGATCGAAAATCAGTACGTT 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625460735729320