Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1002630 120 4e-22 seq1170154 89.7 6e-13 >seq1002630 Length=654 Score = 120 bits (132), Expect = 4e-22 Identities = 373/569 (66%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 || ||| ||| || || |||||||| || ||||| || || ||| | | || | Sbjct 571 GAAGAGGTGGCCGTTTGCAACCTCGCCTCGATCGCCGTCAACATGTACATCAAACC---G 515 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | ||||| || |||| || || ||| | || || ||||| || ||||| |||||||| Sbjct 514 AACAAGACGTTCGATTTCGAGAAGCTCAAGGAGGTCACGAAGACCGTCACGAAAAACCTT 455 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATG 112601 || | | | || || || || ||||| || ||| || | || || ||| Sbjct 454 AATAAAATCATCGACGTCAACTTCTACCCGATTCCCGAG---GCGAAGACCTCGAACATG 398 Query 112602 AGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGC 112661 | || || || || ||| |||| |||| |||||||||||| | ||||| || || Sbjct 397 CGTCATCGACCCATCGGTATCGGCATCCAGGGTCTCGCGGATCTCTTCATCCTGATGCGT 338 Query 112662 CACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTAT 112721 | | || || ||| ||||| || || |||| | | || ||||| ||||| ||| Sbjct 337 TATCCGTTCGAGAGCGAAGAAGCTCAGAAACTCAACGTCCAGATCTTTGAAACAATCTAT 278 Query 112722 CACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTT 112781 ||| |||| | || ||||| | || | || ||| || || ||||| || | Sbjct 277 TACGGCGCTTTGGAAGCGAGCTGCGAACTCGCCGAGAAAGAAGGCCCATACTCTACGTAC 218 Query 112782 GAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATATGTGGGAAGGTGAGACCA 112839 || || | ||| | ||| ||||||| | || || | || |||| |||| || | || Sbjct 217 GAAGGATGTCCGG--TCAGCAAGGGGATTCTACAGTACGACATGT-GGAACGTAACCCCC 161 Query 112840 AGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAAC 112898 | | || || || |||| || ||||||| ||| || | || ||||||| Sbjct 160 ACCAATCTCTGGGATTGGGCAGCACTCAAGGCTAAGATCGCACAGCACGGCGTTCGTAAT 101 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 || | | || || ||||| || || |||||||| || ||| | || ||||| ||| Sbjct 100 TCCCTCCTCCTCGCTCCCATGCCCACGGCTTCCACCGCTCAGATCCTCGGCAATAACGAA 41 Query 112959 TGCTTTGAACCCTACACGACGAACATCTA 112987 | ||| ||||| ||||| | |||||||| Sbjct 40 TCCTTCGAACCGTACACTTCCAACATCTA 12 >seq1170154 Length=949 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||||| ||| || || | |||||||| || ||||||||||||||||| ||| Sbjct 44 TCCTTTGGCGAGAGAATCATTGCATTTGCTGCAGTCGAGGGTATCTTCTTCTCCGGTAGT 103 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || ||| |||| ||| | ||||| || || |||||||| || ||| ||| |||| Sbjct 104 TTTGCCGCCATTTTCTGGTTGAAGAAACGTGGACTCATGCCTGGCCTCACATTCAGCAAC 163 Query 102291 GAGCTTATCTCTCGTGACGAGG 102312 ||| | |||||||| || |||| Sbjct 164 GAGTTGATCTCTCGAGATGAGG 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611289478676560