Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1170154 87.8 2e-12 seq1002630 82.4 9e-11 >seq1170154 Length=949 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 119517 TCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTT 119576 ||||| |||||||| | ||| || ||||| || |||||||||||||| | |||||| Sbjct 183 TCATCTCGAGAGATCAACTCGTTGCTGAATGTGAGGCCAGGCATGAGTCCACGTTTCTTC 124 Query 119577 AGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCG 119636 | ||| || ||||| |||||| || || |||||||| ||||| || || || || Sbjct 123 AACCAGAAAATGGCGGCAAAACTACCGGAGAAGAAGATACCCTCGACTGCAGCAAATGCA 64 Query 119637 AATAGACGCTCAGCAAAAGGTCGAGACTTGT---CGAACCACTTGAGAGCCCAGTTGGCC 119693 | | | ||| |||| | | | || || || ||||| |||||||||| |||| Sbjct 63 ATGATTCTCTCGCCAAAGGATGCACTCTCGTGACAGATCCACTGAAGAGCCCAGTCGGCC 4 Query 119694 TT 119695 || Sbjct 3 TT 2 >seq1002630 Length=654 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 || ||| ||||||||| | ||||| |||||||| | || || ||||| ||||| || Sbjct 3 CGGCGGGTGTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGA 62 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAG 109838 || |||||||| |||||||||||||| | ||| || Sbjct 63 GCGGTGGAAGCCGTGGGCATGGGAGCGAGGAGGAG 97 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580006830519400