Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq959355 102 6e-16
seq1101710 100 2e-15
seq979815 98.7 8e-15
seq424058 95.1 1e-13
seq1030155 87.8 1e-11
>seq959355
Length=592
Score = 102 bits (112), Expect = 6e-16
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765
|||||||| || | ||||| || || ||||| |||| | | |||||||||||||||
Sbjct 132 CCATAAGCCAAGGCTGCAGCGGTGGGCTCGTTGATTACTCGTAAAACATTGAGTCCCGCA 73
Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825
|| | | |||||| ||||| |||||||||| ||| || |||||||||||||||||
Sbjct 72 ATCTGTCCGGCATCTTTTGTGGCCTGACGTTGTGAATCGTTGAAATATGCAGGAACAGTG 13
Query 361826 ATCACTGCTTT 361836
| ||| || ||
Sbjct 12 ACCACAGCATT 2
Score = 100 bits (110), Expect = 2e-15
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | ||||| || |||||||| || || ||||||||||| || || |||||||
Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGATG 62
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| |||| ||||| ||||| |||||| | || | ||||| || || || ||||| ||
Sbjct 63 CCGGACAGATTGCGGGACTCAATGTTTTACGAGTAATCAACGAGCCCACCGCTGCAGCCT 122
Query 550518 TTGCATATGGACTTGATAAA 550537
| || |||||| | || |||
Sbjct 123 TGGCTTATGGAATGGACAAA 142
>seq1101710
Length=836
Score = 100 bits (110), Expect = 2e-15
Identities = 118/158 (75%), Gaps = 4/158 (3%)
Strand=Plus/Minus
Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378
|||||||||||| || || |||||||||| ||| || |||||||| ||||||||||||||
Sbjct 388 ATCTTCAAGTTGCTTACCAGCAAAAATAAATCTCTGTTGATCAGGTGGAATTCCTTCTTT 329
Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGT--ATCAGTGTGAGTACATTCGAGAGTA 563436
||||| | | || |||| ||| ||||| || | || |||| || |
Sbjct 328 CTCTTGCACTAGTTCCTTTATGTACTCTATTGTTGATGAAGGT--TCACATGTAAGTGGG 271
Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| ||||||||||| ||||| || | ||||||| ||||
Sbjct 270 ACCGTTTTACCAGTCAGAGTCTTGAAGAAAATTCGCAT 233
>seq979815
Length=627
Score = 98.7 bits (108), Expect = 8e-15
Identities = 132/184 (72%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057
|| || || || |||||||||||| ||||||||| || | |||||||| ||||| |||
Sbjct 55 GGCATTGACTTGGGAACCACATATTCTTGTGTTGGCGTCTTTCAAAATGGCAAAGTGGAA 114
Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117
||||||||||| || ||||| || | || || ||| || || | |||||||| |
Sbjct 115 ATTATTGCCAACGACCAAGGGAATCGTACAACACCAAGCTACGTGGCATTCACGGATAAC 174
Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177
|||| || |||| || ||||| || | || | || || || || ||||| ||
Sbjct 175 GAACGATTGATTGGGGAAGCAGCCCAAAACCAGGTGGCTATGAACCCAACAAATACAATC 234
Query 550178 TTTG 550181
||||
Sbjct 235 TTTG 238
>seq424058
Length=304
Score = 95.1 bits (104), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457
|||| || | ||||| || |||||||| || || ||||||||||| || || ||||| |
Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGACG 62
Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517
| |||| ||||| || || |||||| | || ||||||| || || || ||||| ||
Sbjct 63 CCGGACAGATTGCGGGCCTCAATGTTTTACGAGTTATCAACGAGCCCACCGCTGCAGCCT 122
Query 550518 TTGCATATGGACTTGATAAA 550537
| || |||||| | || |||
Sbjct 123 TGGCTTATGGAATGGACAAA 142
Score = 87.8 bits (96), Expect = 1e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 361706 CCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCT 361765
|||||||| || | ||||| || || ||||| || | | | ||||||||| |||||
Sbjct 132 CCATAAGCCAAGGCTGCAGCGGTGGGCTCGTTGATAACTCGTAAAACATTGAGGCCCGCA 73
Query 361766 ATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTA 361825
|| | | || ||| ||||| |||||||||| ||| || |||||||||||||||||
Sbjct 72 ATCTGTCCGGCGTCTTTTGTGGCCTGACGTTGTGAATCGTTGAAATATGCAGGAACAGTG 13
Query 361826 ATCACTGCTTT 361836
| ||| || ||
Sbjct 12 ACCACAGCATT 2
>seq1030155
Length=683
Score = 87.8 bits (96), Expect = 1e-11
Identities = 109/148 (74%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326
|||| ||||||||| || || ||| |||||||| | ||||||| |||||||
Sbjct 497 CAAG-TGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGTTCGACCGTCTTCAA 555
Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386
||||||| ||||| || || || || || || || || ||||||||||| || |||||||
Sbjct 556 GTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCCTTCCTTGTCTTGAA 615
Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATC 563414
| || ||| || |||||| || ||
Sbjct 616 TCTTGGCTTTCACATTCTCAATGGTGTC 643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3964868229348770
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |