Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq719486 107 3e-18 seq1046831 98.7 1e-15 >seq719486 Length=401 Score = 107 bits (118), Expect = 3e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 197073 CTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTC 197131 || ||| || |||| ||| || || | | |||||| ||||||| || |||| |||| Sbjct 375 CTCGTTATCCGGATCGTAGCATGCCAAGA-GAAAGCCACCGTAGGCACCAGTTCGTTTTC 317 Query 197132 CCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGT 197191 | || | | || || || || |||| ||| | ||| |||| || || || | || Sbjct 316 CACGTCCAAGGTAACCACCAATCACTACCACATCGATAGTATCGCCAACTCCCTCAAGGT 257 Query 197192 AATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTA 197251 |||||||||| ||||| |||||| | | ||| ||||| ||||||||||| ||||| | Sbjct 256 AATCTTTCTTAAGTTTAAGCCAGTTACGAGACCTCTTTGCAATCTCGTAAGTTGCATCCG 197 Query 197252 CGTCCAGGGTCTTGATCATCAATCCCTCGCA 197282 ||||||||||| | |||||| || || || Sbjct 196 ATTCCAGGGTCTTCACCATCAAACCTTCACA 166 >seq1046831 Length=372 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 197073 CTGGTTGTCGGGATTGTAACAGGCGAGTAAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTC 197131 || ||| || |||| ||| || || | | |||||| || |||| || |||| |||| Sbjct 366 CTCGTTATCCGGATCGTAGCATGCCAAGA-GAAAGCCACCATAGGCACCAGTTCGTTTTC 308 Query 197132 CCACCCCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGT 197191 | || | | || || || || |||| ||| | ||| |||| || || || | || Sbjct 307 CGCGTCCAAGGTAACCACCAATCACTACCACATCGATAGTATCGCCAACTCCCTCAAGGT 248 Query 197192 AATCTTTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTA 197251 |||| ||||| ||||| |||||| | | ||| ||||| ||||||||||| ||||| | Sbjct 247 AATCCTTCTTAAGTTTAAGCCAGTTACGAGACCTCTTTGCAATCTCGTAAGTTGCATCCG 188 Query 197252 CGTCCAGGGTCTTGATCATCAATCCCTCGCA 197282 ||||||||||| | |||||| || || || Sbjct 187 ATTCCAGGGTCTTCACCATCAAACCTTCACA 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666424082500240