Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1002630 159 6e-34 seq1211838 116 7e-21 seq1055522 114 2e-20 seq277695 93.3 8e-14 seq1170154 89.7 9e-13 seq261774 89.7 9e-13 >seq1002630 Length=654 Score = 159 bits (176), Expect = 6e-34 Identities = 435/660 (66%), Gaps = 22/660 (3%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| |||||||| || |||| | ||||| || || || ||||| || ||| Sbjct 11 GTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGA 70 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 || |||||||||||||| | ||||| || | || ||||||| |||| Sbjct 71 AGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGC 130 Query 213068 CCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTC 213127 | || ||||||| ||||| ||| ||| || |||||||||||||| Sbjct 131 CTTGAGTGCTGCCCAATCCCAG-----AGATTGGTGGGGGTT----ACGTTCCACATGTC 181 Query 213128 AAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTC 213187 |||| | || || ||||| || || | || | ||| | ||||| ||||| | | Sbjct 182 GTACTGTAGAATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCTTCTTT 241 Query 213188 CTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCT 213247 || ||| || |||||| ||| | || || |||| ||||| |||||||| |||| Sbjct 242 CTCGGCGAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGAC 301 Query 213248 GTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCA-TCATGCGTTGGAACACATCAG 213306 |||||| |||| || ||| | | ||| || || | ||| | ||| | ||| | Sbjct 302 GTTGAGTTTCTGAGCTTCTTCGCTCTCGAACGG-ATAACGCATCAGGATGAAGAGATCCG 360 Query 213307 CCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCACT 213363 | || ||||||| ||||| |||||||||| || | || ||| || ||| | || Sbjct 361 CGAGACCCTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTTCG---CCT 417 Query 213364 CCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGG 213423 | | ||||| |||||| ||||||||| || || ||||| ||| | || | Sbjct 418 CGGGAATCGGGTAGAAGTTGACGTCGATGATTTTATTAAGGTTTTTCGTGACGGTCTTCG 477 Query 213424 TGACATGGGCCAGGTACTCGTGATTGAAC-ACGTAGCCCCCGTCCTGCACAAACTCAGGC 213482 |||| | || | |||| || |||| | | | | || ||| | Sbjct 478 TGACCTCCTTGAGCTTCTCGAAATCGAACGTCTTGTTCGGTTTGATGTACATGTT----G 533 Query 213483 AGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATC 213542 | |||||| ||| |||||||||||||||||||| | | ||| |||| | ||| Sbjct 534 ACGGCGATCGAGGCGAGGTTGCAAACGGCCACCTCTTCCGGCGAAGTGAACTCGACAATC 593 Query 213543 TCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTG 213602 || ||||| ||||||||||| || || ||||| || ||||| ||||| ||||||| |||| Sbjct 594 TCCGTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTG 653 >seq1211838 Length=1880 Score = 116 bits (128), Expect = 7e-21 Identities = 184/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| || ||||||||||| ||||| |||||||| |||||||| || ||||| Sbjct 376 GTACATCTCGGAATGCACATTCTCCATAGCAATCTGGAAACCGTAGAAACACCGCGCCTC 317 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | ||||||||| | ||| | |||| |||||||| ||||| || || || || Sbjct 316 CGTTATCTGCACTTCCTGGCTGAACCGTTCCACGAGATTCTCGTTGACGATTCCGTCCGA 257 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || ||||||||||| | || || | |||||| | ||| | |||| || | Sbjct 256 TGCGGCAAAGAAGGCCAACACGTGCGAGATGAAATGCCTCTCTCCATCTTTGAGGGCCTC 197 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 |||| | ||| ||| ||||| || ||||| | |||||||| || || ||| Sbjct 196 CCAGTGAGCCATGTCCTTGGATAGGTCGACCTCTTCTGCTGTCCAGAATGAGGCTTCTGC 137 Query 48664 TTTTTTGTACATGCCCCATATGTC 48687 || |||||||| ||| ||||| Sbjct 136 CTTCTTGTACATCAGCCAGATGTC 113 >seq1055522 Length=411 Score = 114 bits (126), Expect = 2e-20 Identities = 197/280 (70%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 213780 GGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838 |||||||| || ||||| ||| || | |||| ||| | || |||||||||||| || | Sbjct 40 GGACACATCAGACTCCAATCCAGGTTCTTCTC-GACGCGCTCCATGAACAGGTCGGGAAT 98 Query 213839 CCACAGCGCGGTGAACAGGTCCCTGG-TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCA 213897 ||| || ||| ||||| |||||||| || || || ||| || | |||||| | Sbjct 99 CCAGAGGGCGTAGAACAAGTCCCTGGCTCGAACT-TCCTCCTTGCCCGTGTTTTTCTTGA 157 Query 213898 GATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG 213957 |||| || || || |||| |||||||||||| || |||| ||||| || || ||||| | Sbjct 158 GATCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGATTGCGAACGCGCCGG 217 Query 213958 ---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGG 214014 || | |||||||| ||||| || | || ||||| ||| ||||| | | Sbjct 218 GGCGCTTGTTGCCGCCTTGGTCGACGTAACGTGCTGTGTTGTTGTAGACGCGCAACATAG 277 Query 214015 GTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATA 214054 | || | |||||||| |||||||| || || || || Sbjct 278 GAACTATACCGTTGGATATGCCGTTGGTGCCGGCGATGTA 317 >seq277695 Length=258 Score = 93.3 bits (102), Expect = 8e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA-T 212754 ||| || || || |||||||| ||||| | ||||||| |||||||| | ||||| | Sbjct 157 GTTGAGCGATTGGCTCTGGTCGATGAACGCTCCCCTGTCGGCGGCCATCTTGATGATGGT 98 Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGG 212814 || ||||||||| |||||||||||||||| ||| | ||||| || || || | ||| Sbjct 97 CT-TCTGGGAGATCTCCCACACGGTCTTGTAGAGAGCCTTGAGATCGTCGGGAATACCGT 39 Query 212815 GGATGTTCTGCACAGACCCCCTGTG 212839 ||| | ||| || || |||| ||| Sbjct 38 CGATATCCTGGACGGAACCCCCGTG 14 >seq1170154 Length=949 Score = 89.7 bits (98), Expect = 9e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 48166 GATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAAT 48225 ||| | | ||||| ||| ||| |||||||||| || | | || | ||||||||| Sbjct 172 GATCAACTCGTTGCTGAATGTGAGGCCAGGCATGAGTCCACGTTTCTTCAACCAGAAAAT 113 Query 48226 TGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTC 48285 || || ||| || ||||||||||| ||||| ||||| || || || ||| ||||| Sbjct 112 GGCGGCAAAACTACCGGAGAAGAAGATACCCTCGACTGCAGCAAATGCAATGATTCTCTC 53 Query 48286 TCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTC 48337 || || || || ||| || ||||||| ||| |||||||| |||||| Sbjct 52 GCCAAAGGATGCACTCTCGTGACAGATCCACTGAAGAGCCCAGTCGGCCTTC 1 >seq261774 Length=254 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 213546 GTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCA 213605 ||||| ||||||||||| || || ||||| || ||||| ||||| ||||||| |||| | Sbjct 3 GTGCAGAGGTTGCTGCAACGAATCGTGCCGAGATTCTGCTGGTTCGACTTTGAGTTGCAA 62 Query 213606 GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGA 213649 | || ||||| |||||||| || | ||||| || | |||||| Sbjct 63 GCGTCTTTGTACAGCATGTATGGCGTTCCGGTTTCGACCTGGGA 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917347034264320