Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1211838 159 6e-34 seq1055522 120 6e-22 >seq1211838 Length=1880 Score = 159 bits (176), Expect = 6e-34 Identities = 198/267 (74%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| ||||||||||||||| || |||| |||||| || |||||| | || Sbjct 113 GACATCTGGCTGATGTACAAGAAGGCAGAAGCCTCATTCTGGACAGCAGAAGAGGTCGAC 172 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACG---AGCAGCATTTTCTC 25590 || |||||||||||| |||| | || || |||||| | || |||||| || Sbjct 173 CTATCCAAGGACATGGCTCACTGGGAGGCCCT---CAAAGATGGAGAGAGGCATTTCATC 229 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGA 25649 | |||||||||| |||||||| || || || || || || ||||||||||| ||| || Sbjct 230 TCGCACGTGTTGGCCTTCTTTGCCGCATCGGACGGAATCGTCAACGAGAATCTCGTG-GA 288 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | |||| | |||||||||| |||||| ||||||||||||||||||||| || Sbjct 289 ACGGTTCAGCCAGGAAGTGCAGATAACGGAGGCGCGGTGTTTCTACGGTTTCCAGATTGC 348 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTA 25736 || || |||||||| || ||| |||| Sbjct 349 TATGGAGAATGTGCATTCCGAGATGTA 375 >seq1055522 Length=411 Score = 120 bits (132), Expect = 6e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 ||||||||||||||||| | | ||| | | ||| | || |||||| ||||| || ||| Sbjct 40 GGACACATCAGACTCCAATCCAGGTTCTTCTCGACGCGCTCCATGAACAGGTCGGGAATC 99 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || || || | || | || |||| || |||||| ||| |||||||| | ||| Sbjct 100 CAGAGGGCGTAGAACAAGTCCCTGGCTCGAACTTCCTCCTTGCCCGTGTTTTTCTTGAGA 159 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | || || || | ||| |||||||| || |||||||||| || | |||||||| Sbjct 160 TCGAGGAATTCGAAGACGTCCGCGTGCCAGGGTTCCAGATAGATTGCGAACGCGCCGGGG 219 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGG 222237 ||||||||||| || || || | | | | | | | |||| ||| ||| | | || Sbjct 220 CGCTTGTTGCCGCCTTGGTCGA-CGTAACGTGCTGTGTTGTTGTAGACGCGCAACATAGG 278 Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCC 222267 || | ||||||||| ||||||||||| Sbjct 279 AACTATACCGTTGGATATGCCGTTGGTGCC 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914699968237120