Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq959355 95.1 8e-14 seq424058 95.1 8e-14 seq1030155 86.0 4e-11 >seq959355 Length=592 Score = 95.1 bits (104), Expect = 8e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | |||||||| |||||||| || ||||| |||||||| || || ||||||| Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGATG 62 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| ||||| || || ||||||||||| | || || || || || || || || Sbjct 63 CCGGACAGATTGCGGGACTCAATGTTTTACGAGTAATCAACGAGCCCACCGCTGCAGCCT 122 Query 474855 TTGCTTATGG 474864 | |||||||| Sbjct 123 TGGCTTATGG 132 >seq424058 Length=304 Score = 95.1 bits (104), Expect = 8e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | |||||||| |||||||| || ||||| |||||||| || || ||||| | Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGACG 62 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | ||| ||||| || || ||||||||||| |||| || || || || || || || Sbjct 63 CCGGACAGATTGCGGGCCTCAATGTTTTACGAGTTATCAACGAGCCCACCGCTGCAGCCT 122 Query 474855 TTGCTTATGG 474864 | |||||||| Sbjct 123 TGGCTTATGG 132 >seq1030155 Length=683 Score = 86.0 bits (94), Expect = 4e-11 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | ||| || | ||||| ||| || || || || ||||| | ||||| Sbjct 482 ACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAGAGAGT 541 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||||||||||| || || || || || || | ||||| || || |||||||| Sbjct 542 TCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGGAATTCC 601 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||||||||||||||| ||| ||| ||||| || || Sbjct 602 TTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTC 643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3215921559969404