Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1119540 105 9e-18 >seq1119540 Length=600 Score = 105 bits (116), Expect = 9e-18 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 47944 GTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATA 48003 || ||||| ||||| || ||| | || || | ||| ||| ||| || || || || || Sbjct 137 GTGATCTTCCGAGTCACGAAACTCTCCCCTCTTCTCGGACTTTCGTGGTTGAAGAGGATG 196 Query 48004 CCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAG 48063 || |||| || |||| |||||| ||||| ||||| |||||||||||| | ||| Sbjct 197 CCGTTACATGCGAACATGTCGTATGCCTCACGGTAGTTAACGACTATCCAGTACGCGTAG 256 Query 48064 AGTTTTGCAACAC-CATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGT 48122 || || || |||| | ||||| || || || || || || || || ||||||||||| | Sbjct 257 AGCTTGGC-ACACGCGTAAGGTGACCGCGGGTAAAAGGGGGTAGTTTCTGTCTGTGGTAT 315 Query 48123 CTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATA 48164 || ||||| || || ||||| || || |||||||| Sbjct 316 TTCGGCGACCTTTCCGTACAGTTCGGAAGTAGACGCTTGATA 357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655359976760360