Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1030155 167 3e-36 seq985049 149 8e-31 seq1215171 113 6e-20 seq1101710 113 6e-20 seq979815 102 1e-16 seq1029433 100 4e-16 seq1005753 98.7 1e-15 seq424058 93.3 5e-14 seq959355 84.2 3e-11 seq25371 84.2 3e-11 seq747296 82.4 1e-10 >seq1030155 Length=683 Score = 167 bits (184), Expect = 3e-36 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 ||||| || ||||| || || |||||| | || ||||| || || || | ||||||||| Sbjct 676 GGAAAGACCATCACTCTTGAAGTTGAGGCCTCGGACACCATTGAGAATGTGAAAGCCAAG 617 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 |||||||| |||||||| ||||| || || || || | || || || || || ||||| Sbjct 616 ATTCAAGACAAGGAAGGAATTCCCCCAGACCAACAGAGGCTGATCTTCGCCGGCAAACAA 557 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTT 172068 |||||||| || || || ||| | ||||||||| |||| ||||||||||| || ||| | Sbjct 556 CTTGAAGACGGTCGAACTCTCTCCGATTACAACATTCAGAAGGAGTCTACCCTTCACTTG 497 Query 172069 GTTCTAAGGCTTCGGGGTGGTG 172090 ||||| || ||||| ||||||| Sbjct 496 GTTCTCAGACTTCGTGGTGGTG 475 >seq985049 Length=630 Score = 149 bits (164), Expect = 8e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || ||||||||||| || || ||||| || ||||| || || || | || Sbjct 572 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCTTCC 513 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| || ||||| ||||| || || ||||| ||||| || || Sbjct 512 GATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGACCAA 453 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || |||||||| ||| | |||||||| |||||| | | || |||||| Sbjct 452 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTACAAC 393 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | |||||||| || || || ||| | || || | ||||| ||||| Sbjct 392 ATCCAAAAGGAATCAACACTCCACTTGGTCCTGCGTCTTCGTGGTGG 346 >seq1215171 Length=2551 Score = 113 bits (124), Expect = 6e-20 Identities = 217/318 (68%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685 ||||| ||||| || || ||| | ||||| | ||||||||||||||||||||| || Sbjct 1584 TTTGCCCCCGAGGAGATCTCGGCCATGGTTCTCGGCAAGATGAAGGAGACTGCGGAAGCT 1643 Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745 | | |||| || | |||| | || || || || || || || ||||||| || | Sbjct 1644 TACCTGGGCAAGAAGGTGACGCACGCCGTGGTAACGGTCCCCGCCTACTTCAACGACGCC 1703 Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 || |||||||| ||||||||||| | | || | || || | || || ||| Sbjct 1704 CAGCGACAGGCCACAAAGGACGCCGGAACAATCTCTGGACTCGTGGTAATGAGGATCATC 1763 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || || || ||||| |||||| | | |||| || || Sbjct 1764 AACGAGCCGACTGCTGCGGCCATCGCCTACGGTCTCGACAAG--CGA-GACGGCGAGAAG 1820 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || || || |||| ||| | || || || || || || ||||| ||||| | || || Sbjct 1821 AACGTTCTGGTCTTCGATTTAGGCGGCGGCACTTTCGACGTCTCTCTTCTTACCATCGAC 1880 Query 195926 GGTGGTATATTCGAAGTA 195943 ||| | ||||| ||| Sbjct 1881 AATGGAGTTTTCGAGGTA 1898 >seq1101710 Length=836 Score = 113 bits (124), Expect = 6e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 171952 CAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTT 172011 ||||| || ||||| |||||||| ||||| || || |||||||||||||||| || ||| Sbjct 323 CAAGAGAAAGAAGGAATTCCACCTGATCAACAGAGATTTATTTTTGCTGGTAAGCAACTT 382 Query 172012 GAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTT 172071 |||||||| ||||| || ||||| ||| | || |||||||| | ||||||||||| Sbjct 383 GAAGATGGCCGTACACTTTTAGATTATAACATACAGAAGGAGTCAATGTTACACCTTGTT 442 Query 172072 CT 172073 || Sbjct 443 CT 444 >seq979815 Length=627 Score = 102 bits (112), Expect = 1e-16 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 195303 TTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAG 195362 |||| || || || ||||| || || || |||||||| || | ||||||| || | Sbjct 53 TTGGCATTGACTTGGGAACCACATATTCTTGTGTTGGCGTCTTTCAAAATGGCAAAGTGG 112 Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 | ||||| | || |||||||| || |||||||| ||| ||||| || || || |||| Sbjct 113 AAATTATTGCCAACGACCAAGGGAATCGTACAACACCAAGCTACGTGGCATTCACGGATA 172 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 | ||||| | |||| || || || |||| ||| ||||||||||| | ||||| Sbjct 173 ACGAACGATTGATTGGGGAAGCAGCCCAAAACCAGGTGGCTATGAACCCAACAAATACAA 232 Query 195483 TCTTTG 195488 |||||| Sbjct 233 TCTTTG 238 >seq1029433 Length=693 Score = 100 bits (110), Expect = 4e-16 Identities = 342/529 (65%), Gaps = 7/529 (1%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||| || ||||| | || || || ||||| || || || || | ||| | | Sbjct 541 GCTATCGGCATCGACCTGGGGACCACGTACTCGTGCGTGGGGGTCTATCAACAGGGCAAG 482 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || |||||||| ||||| ||||| || || || || || || Sbjct 481 GTTGAGATCATTGCCAACGACCAAGGTAACCGAACAACGCCGAGCTATGTCGCGTTCACG 422 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | |||||||| | || || ||||| || || ||| || ||||| || | || Sbjct 421 GACACGGAACGTCTGATAGGTGACGCCGCCAAGAACCAGGTGGCCATGAATCCGTTGAAC 362 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCG--GATAAGAAAGTCCAAG 195536 || || || |||||||||||||| ||||| || | |||| || || || | Sbjct 361 ACGGTGTTCGACGCGAAGCGTCTGATTGG--GCGACGCTTCGACGACGCCAAGATCGCGG 304 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | || || ||| | ||| | | | ||| || || | | | ||||| | ||| Sbjct 303 AGGACATGAAGCATTGGCCGT-TCAAG--GTCGTCGACGACGGAGGCAAGCCCAAGATCC 247 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGT 195656 | | || | || |||| ||| | || | |||| || || || ||||||| Sbjct 246 AGGCGGAGGCGAAGGGGGAGACGAAGCGGTTCTCAGCCGAGGAGATCAGCTCGATGGTGT 187 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 ||| |||||||||||||| || || | | |||| |||| || || || Sbjct 186 TGACGAAGATGAAGGAGACGGCCGAGGCGTATCTGGGGGGCGTCGTGAGGGACGCCGTCA 127 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || ||||| || ||||||| || || || || |||||||| |||||||| | | | Sbjct 126 TCACCGTACCCGCCTACTTCAACGACTCCCAGCGTCAGGCGACCAAGGACGCGGGGGTGA 67 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGC 195825 | ||||| || ||| || | || ||||| || || || || || || Sbjct 66 TCGCGGGGCTCAACGTCCTCCGCATCATCAACGAGCCGACCGCCGCGGC 18 >seq1005753 Length=659 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| | || || || ||||| || || || || | ||| | | Sbjct 288 GCCATCGGCATCGACCTGGGGACCACGTACTCGTGCGTGGGGGTCTACCAACAGGGCAAG 347 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || |||||||| ||||| ||||| || || || || || ||| Sbjct 348 GTGGAGATCATTGCCAACGACCAAGGTAACCGAACAACGCCGAGTTATGTCGCGTTCACA 407 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | ||||||||| | || || ||||| || || ||| || |||||||| | || Sbjct 408 GACACTGAACGTCTGATAGGTGACGCCGCTAAGAACCAGGTGGCCATGAACCCGTTGAAC 467 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCG 195510 || || || |||||||||||||| ||||| || Sbjct 468 ACGGTGTTCGACGCGAAGCGTCTGATTGGGCG 499 >seq424058 Length=304 Score = 93.3 bits (102), Expect = 5e-14 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || ||||| ||||| || |||| ||||||||||| ||||| ||||| |||| Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGACG 62 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCA 195826 | | |||||||| || || ||| ||| || ||||||| || || || || || || Sbjct 63 CCGGACAGATTGCGGGCCTCAA-TGTTTTACGAGTTATCAACGAGCCCACCGCTGCAGCC 121 Query 195827 ATTGCTTATGGTCTGGACAA 195846 | |||||||| ||||||| Sbjct 122 TTGGCTTATGGAATGGACAA 141 >seq959355 Length=592 Score = 84.2 bits (92), Expect = 3e-11 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || ||||| ||||| || |||| ||||||||||| ||||| ||||| || | Sbjct 3 ATGCTGTGGTCACTGTTCCTGCATATTTCAACGATTCACAACGTCAGGCCACAAAAGATG 62 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCA 195826 | | |||||||| || || ||| ||| || | ||||| || || || || || || Sbjct 63 CCGGACAGATTGCGGGACTCAA-TGTTTTACGAGTAATCAACGAGCCCACCGCTGCAGCC 121 Query 195827 ATTGCTTATGGTCTGGACAA 195846 | |||||||| ||||||| Sbjct 122 TTGGCTTATGGAATGGACAA 141 >seq25371 Length=204 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| |||||||||||||| || || || || || ||||| || ||||| ||| |||| Sbjct 101 ATGCAGATCTTTGTGAAAACTCTGACGGGCAAGACCATCACACTAGAGGTGGAGGCGTCC 160 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 || || || || || | || |||||||| ||||| ||||| || Sbjct 161 GATACCATTGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGG 204 >seq747296 Length=445 Score = 82.4 bits (90), Expect = 1e-10 Identities = 185/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 |||||||| || || |||||||||| |||||||||||||| || || | | | Sbjct 443 CCCGAAGAGATCAGCTCGATGGTGTTGACCAAGATGAAGGAGACGGCCGAGGCGTATCTA 384 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || | |||| || || || | || || || || ||||||| || || || || Sbjct 383 GGGGGCGCCGTGAGGGACGCCGTCATCACGGTGCCGGCCTACTTCAACGACTCTCAGCGC 324 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 || ||||| |||||||| | || || || || || ||| || | || ||||| || Sbjct 323 CAAGCGACCAAGGACGCCGGAGCCATCGCCGGGCTCAACGTCCTCCGCATCATCAACGAG 264 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || | || || || || ||||||||| | | || ||| || Sbjct 263 CCGACGGCCGCGGCGCTGGCCTACGGCCTCGACAAGAACCTCAAGGGTGAGCGAAACGTG 204 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTC 195909 | ||||| || || || ||||| || || || || || Sbjct 203 CTAATCTTCGACCTGGGCGGTGGGACATTCGACGTGTC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 647844200004560