Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq985049 136 8e-27 seq1101710 95.1 2e-14 >seq985049 Length=630 Score = 136 bits (150), Expect = 8e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 192303 AATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATA 192362 ||||| ||||| | |||||| | || || || | || | || || ||| || || Sbjct 339 AATAACGCCACCACGAAGACGCAGGACCAAGTGGAGTGTTGATTCCTTTTGGATGTTGTA 398 Query 192363 ATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422 || || || || || |||| ||||| || |||||||| ||||| || | |||||| || Sbjct 399 GTCGGACAAGGTACGGCCATCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTC 458 Query 192423 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGA 192482 ||||| || || ||||| ||||| || || || ||||| |||| ||| || | Sbjct 459 TGGTGGGATGCCCTCTTTGTCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGC 518 Query 192483 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 |||||||||||| |||||||||||||| || | ||||| | || |||||||||||| Sbjct 519 TTCTACTTCTAGGGTAATGGTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTA 576 >seq1101710 Length=836 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || |||||||| | | ||| || |||| || | ||| ||||||||||| || |||||| Sbjct 414 ATGTTATAATCTAAAAGTGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAATCTC 355 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 |||||||||||||| ||||||||||| ||||| Sbjct 354 TGTTGATCAGGTGGAATTCCTTCTTTCTCTTG 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 969113130773550