Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq985049 129 1e-24 seq1030155 93.3 8e-14 seq1101710 86.0 1e-11 >seq985049 Length=630 Score = 129 bits (142), Expect = 1e-24 Identities = 124/159 (78%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || ||||| || |||||||| || || || | ||||||||| ||||| || || ||||| Sbjct 418 TCTTCCAACTGCTTACCAGCGAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCTTTG 477 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || || ||||| |||||||| || | |||||||||||| |||||| Sbjct 478 TCTTGGATCTTCGCCTTGACATTCTCGATAGTATCGGAAGCTTCTACTTCTAGGGTAATG 537 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073 |||||||| || | ||||| | ||| |||||||||||| Sbjct 538 GTTTTACCCGTGAGGGTTTTCACGAAAATCTGCATTTTA 576 >seq1030155 Length=683 Score = 93.3 bits (102), Expect = 8e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||||| | || || || | |||| ||| || ||| || ||||| || Sbjct 476 ACCACCACGAAGTCTGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 535 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | || ||| |||| || | |||||| || || || || | ||||||||||| || || Sbjct 536 GAGAGTTCGACCGTCTTCAAGTTGTTTGCCGGCGAAGATCAGCCTCTGTTGGTCTGGGGG 595 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 |||||||| || ||||| || || ||| ||||| || || || || | || || Sbjct 596 AATTCCTTCCTTGTCTTGAATCTTGGCTTTCACATTCTCAATGGTGTCCGAGGCCTCAAC 655 Query 172022 TTCTAGAGTAATGGTTTTACC 172042 ||| ||||| ||||| || || Sbjct 656 TTCAAGAGTGATGGTCTTTCC 676 >seq1101710 Length=836 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || ||||||||| | | | || | || || | ||| |||||||||||||| |||||| Sbjct 414 ATGTTATAATCTAAAAGTGTACGGCCATCTTCAAGTTGCTTACCAGCAAAAATAAATCTC 355 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||| |||||||| ||||||||||| ||||| Sbjct 354 TGTTGATCAGGTGGAATTCCTTCTTTCTCTTG 323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 891352215623400