Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq555338 80.6 9e-11 >seq555338 Length=352 Score = 80.6 bits (88), Expect = 9e-11 Identities = 91/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 40251 AAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATG 40310 |||||||| |||| ||||||||||| || ||||| || |||| || |||||||| | Sbjct 137 AAGTCGATATCGAAGTCGGGCATGGATACCCGCTCAGGATTCAAAAATCGCTCGAACAGC 78 Query 40311 AGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCG 40370 || || | |||||| |||||||| || || ||| |||| || |||||||| || Sbjct 77 AGGTTGTATTGCAGCGGATCGAGGTCAGTAATTTTGAGCGCGTAAGCCACCAGCGAGCCT 18 Query 40371 GC 40372 || Sbjct 17 GC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160961981445414