Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq406137 172 1e-38 seq170843 125 2e-24 >seq406137 Length=297 Score = 172 bits (190), Expect = 1e-38 Identities = 197/262 (75%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 39097 GAAATGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGAT-TTT 39155 ||| |||||||||||||||||| ||||||| | |||||| ||| ||| | | || ||| Sbjct 262 GAACTGAAGTGGTCAACAAAAATTGGCCACGGCTTTAGAGCTTTCCCAAAA-CAATCTTT 204 Query 39156 CCGATTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATC 39215 | ||||| || || | ||| ||||||||||||| ||| ||||| || |||||||| | Sbjct 203 CTGATTCATTGGGTGTTAATCCACCGTTATATTGGTGGGGTCTGAGCTGGCTGTAATAGC 144 Query 39216 CCACGATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCG 39275 | | |||||| | ||||| || | ||| ||||| || | ||||| || || Sbjct 143 CAATGATATAATTAGTTATCGCTTTGTTTGCTTCGCTAAAATTAACGTAGCCACTTTTCG 84 Query 39276 GCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGT 39335 | | |||||| |||||| || | ||| ||||||||||| |||||||||||||| || | Sbjct 83 GTACCCATTCTGACTTCAGGCTGCGGAAAAAGCGTTCCATCGGGCTGTTATCCCAACAAT 24 Query 39336 TTCCGCGCCGGCTCATACTCTG 39357 |||| ||||| ||||| || || Sbjct 23 TTCCTCGCCGACTCATGCTTTG 2 >seq170843 Length=231 Score = 125 bits (138), Expect = 2e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 39512 CATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCA 39571 ||| |||||||| | ||| || | | |||| || || || || || || || ||||| Sbjct 1 CATTGCCCAGCCTATTGGCTTGCGAGAAAACAAATCCAGTACCACCGCCAGATAAGCCCA 60 Query 39572 GCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCAC 39631 ||| || |||||||||| ||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct 61 GCGTTTGCCCGTCCAGAGATACGTCACATCACCGCACCAGACCTGATTAGGCTCCGTCAC 120 Query 39632 GGCGAACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTC 39673 |||||||| | || || | || |||||| | ||||| || Sbjct 121 CGCGAACTGACGATCCAGATGATTCGGGATATCCACATGCTC 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130680100024562