Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24]
1,218,273 sequences; 509,522,935 total letters
Query= NC_021857.1
Length=41475
Score E
Sequences producing significant alignments: (Bits) Value
seq406137 172 1e-38
seq170843 125 2e-24
>seq406137
Length=297
Score = 172 bits (190), Expect = 1e-38
Identities = 197/262 (75%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 39097 GAAATGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGAT-TTT 39155
||| |||||||||||||||||| ||||||| | |||||| ||| ||| | | || |||
Sbjct 262 GAACTGAAGTGGTCAACAAAAATTGGCCACGGCTTTAGAGCTTTCCCAAAA-CAATCTTT 204
Query 39156 CCGATTCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATC 39215
| ||||| || || | ||| ||||||||||||| ||| ||||| || |||||||| |
Sbjct 203 CTGATTCATTGGGTGTTAATCCACCGTTATATTGGTGGGGTCTGAGCTGGCTGTAATAGC 144
Query 39216 CCACGATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCG 39275
| | |||||| | ||||| || | ||| ||||| || | ||||| || ||
Sbjct 143 CAATGATATAATTAGTTATCGCTTTGTTTGCTTCGCTAAAATTAACGTAGCCACTTTTCG 84
Query 39276 GCATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGT 39335
| | |||||| |||||| || | ||| ||||||||||| |||||||||||||| || |
Sbjct 83 GTACCCATTCTGACTTCAGGCTGCGGAAAAAGCGTTCCATCGGGCTGTTATCCCAACAAT 24
Query 39336 TTCCGCGCCGGCTCATACTCTG 39357
|||| ||||| ||||| || ||
Sbjct 23 TTCCTCGCCGACTCATGCTTTG 2
>seq170843
Length=231
Score = 125 bits (138), Expect = 2e-24
Identities = 125/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 39512 CATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCA 39571
||| |||||||| | ||| || | | |||| || || || || || || || |||||
Sbjct 1 CATTGCCCAGCCTATTGGCTTGCGAGAAAACAAATCCAGTACCACCGCCAGATAAGCCCA 60
Query 39572 GCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCAC 39631
||| || |||||||||| ||| ||||||||||||||||| |||||||| ||||| |||||
Sbjct 61 GCGTTTGCCCGTCCAGAGATACGTCACATCACCGCACCAGACCTGATTAGGCTCCGTCAC 120
Query 39632 GGCGAACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTC 39673
|||||||| | || || | || |||||| | ||||| ||
Sbjct 121 CGCGAACTGACGATCCAGATGATTCGGGATATCCACATGCTC 162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130680100024562
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |