Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1197828 136 5e-26 seq1211838 132 6e-25 seq1170154 109 7e-18 >seq1197828 Length=1358 Score = 136 bits (150), Expect = 5e-26 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCG-TGGGACAAGGAGTTTTGCGACGTCGAGCAGCCC 1592164 |||| || |||||||||||| || | |||||| || || | | ||||| ||| Sbjct 948 AGAAACGAACCGACGACATCA-GCAGCTGGGACGCAGACTTCCTCAAGGTCGACCAGGGA 890 Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || || ||||| |||||||||||||||||||||||||||||||| ||||| || | Sbjct 889 ACGCTGTTTGAACTGATCCTCGCCGCCAACTACCTCGACATCAAGGGGCTGCTAGACGTC 830 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 ||||||| | || |||||||||||||| || ||| | || || |||||| | || ||| Sbjct 829 ACGTGCAAGACCGTCGCCAACATGATCAAAGGAAAGACCCCGGAAGAGATCAGAAAAACC 770 Query 1592285 TTTAACATCAAG 1592296 || ||||||||| Sbjct 769 TTCAACATCAAG 758 >seq1211838 Length=1880 Score = 132 bits (146), Expect = 6e-25 Identities = 213/306 (70%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 869642 TTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTC 869701 ||||| || || |||||||| ||||| || || | |||| | | || || |||| Sbjct 357 TTCTCCATAGCAATCTGGAAACCGTAGAAACACCGCGCCTCCGTTATCTGCACTTCCTGG 298 Query 869702 ATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGG 869761 ||||||| | | || |||||| ||||| ||||| ||||| || || |||| Sbjct 297 CTGAACCGTTCCACGAGATTCTCGTTGACGATTCCGTCCGATGCGGCAAAGAAGGCCAAC 238 Query 869762 ACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCGGCG 869821 |||||| ||| || || | ||| | || |||| | | ||||||| | |||| | Sbjct 237 ACGTGCGAGATGAAATGCCTCTCTCCATCTTTGAGGGCCTCCCAGTGAGCCATGTCCTTG 178 Query 869822 CTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCAT 869881 ||||| ||||| || || ||||||| ||||| || ||||| ||||||||| ||| Sbjct 177 GATAGGTCGACCTCTTCTGCTGTCCAGAATGAGGCTTCTGCCTTCTTGTACATCAGCCAG 118 Query 869882 ACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGT 869941 | | ||||| |||||||||||| || |||||| ||| || ||||| | || ||| Sbjct 117 ATGTCATGGTACTGGATAGGGAAGATCACGAAGCGGCGGGGATTTTCGCGGAGGAGAGGT 58 Query 869942 TCGAGC 869947 || ||| Sbjct 57 TCCAGC 52 >seq1170154 Length=949 Score = 109 bits (120), Expect = 7e-18 Identities = 138/187 (74%), Gaps = 7/187 (4%) Strand=Plus/Minus Query 869183 TCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTG 869242 || || ||| ||||| |||||||| || | |||||| |||||||| || || ||||| Sbjct 183 TCATCTCGAGAGATCAACTCGTTGCTGAATGTGAGGCCAGGCATGAGTCCACGTTTCTTC 124 Query 869243 AGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCG 869302 | ||| || |||||| ||||| || ||||| ||||| |||||||| || ||||| | Sbjct 123 AACCAGAAAATGGCGGCAAAACTACCGGAGAAGAAGATACCCTCGACTGCAGCAAATGCA 64 Query 869303 ATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTC-CTTGTT-GATCCACTTCATCGCCCAGT 869360 |||| | |||| |||||| | || ||| | || |||||||| | ||||||| Sbjct 63 ATGATTCTCTCGCCAAAGG-----ATGCACTCTCGTGACAGATCCACTGAAGAGCCCAGT 9 Query 869361 CGGCCTT 869367 ||||||| Sbjct 8 CGGCCTT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6007162012447541