Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Isoperla_20grammatica_20[genbank_20GCA_5F001676475.1_202016-06-24] 1,218,273 sequences; 509,522,935 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq985049 161 9e-35 seq1055522 113 4e-20 seq1002630 86.0 6e-12 >seq985049 Length=630 Score = 161 bits (178), Expect = 9e-35 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || |||||||| ||||| || ||||||||||| || Sbjct 572 ATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACCATTACCCTAGAAGTAGAAGCTTCC 513 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||||||||| || || || || || ||| Sbjct 512 GATACTATCGAGAATGTCAAGGCGAAGATCCAAGACAAAGAGGGCATCCCACCAGACCAA 453 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||| |||| ||| | | | |||| || || ||| Sbjct 452 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACCTTGTCCGACTACAAC 393 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 || ||||||||||| ||||| |||||||| |||| | || || |||| | |||||| Sbjct 392 ATCCAAAAGGAATCAACACTCCACTTGGTCCTGCGTCTTCGTGGTGGCGTTATTGAGCCC 333 Query 24944 AC 24945 || Sbjct 332 AC 331 >seq1055522 Length=411 Score = 113 bits (124), Expect = 4e-20 Identities = 206/298 (69%), Gaps = 13/298 (4%) Strand=Plus/Plus Query 139344 GTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGAC 139403 ||| | |||| || |||| | || |||||||| || ||| | |||| || ||| Sbjct 15 GTCGGCAAGACCGGGACAATCGTGCGGACACATCAGACTCCAATCCAGGTTCTTCTCGAC 74 Query 139404 GCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTA-- 139461 |||| ||||||||| || |||||||| | ||| | | ||| || | || || | Sbjct 75 GCGCTCCATGAACAGGTCGGGAATCCAGAGGGCGTAGAACAAGTCCCTGGC--TCGAACT 132 Query 139462 TCTTCCGAACCCATGTTACGTTTCATGTTA---AGGAAATCAAAAACGTCAGCGTGCCAT 139518 || ||| ||| |||| |||| || | ||||| || || ||||| |||||||| Sbjct 133 TCCTCCTTGCCCGTGTT---TTTCTTGAGATCGAGGAATTCGAAGACGTCCGCGTGCCAG 189 Query 139519 GGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGT 139575 |||||||||||||| || | ||||| || ||||| ||||| ||||||| ||| Sbjct 190 GGTTCCAGATAGATTGCGAACGCGCCGGGGCGCTTGTTGCCGCCTTGGTCGACGTAACGT 249 Query 139576 ACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGC 139633 | | || ||| | ||||||||||| || | | |||| | | | | |||||||||| Sbjct 250 GCTGTGTTGTTGTAGACGCGCAACATAGGAACTATACCGTTGGATATGCCGTTGGTGC 307 >seq1002630 Length=654 Score = 86.0 bits (94), Expect = 6e-12 Identities = 288/447 (64%), Gaps = 6/447 (1%) Strand=Plus/Plus Query 138540 GTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGT 138599 ||| |||||| ||| | || || || |||||||| || || || |||||||| |||| Sbjct 11 GTAGATGTTGGAAGTGTACGGTTCGAAGGATTCGTTATTGCCGAGGATCTGAGCGGTGGA 70 Query 138600 CGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTC 138659 || || |||||| || | | || ||||| || | ||||| | ||| | Sbjct 71 AGCCGTGGGCATGGGAGCGAGGAGGAGGGAATTACGAACGCCGTGCTGTGCGATCTTAGC 130 Query 138660 CTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAA 138719 |||||| | | ||| ||||| | || | | || || ||||||||| |||||||||| Sbjct 131 CTTGAGTGCTGCCCAATCCCAGAGATTGGTGGGGGTTACGTTCCACATGTCGTACTGTAG 190 Query 138720 CATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGC---GC 138776 || ||| || | |||| |||||||||| | |||| || |||| | || Sbjct 191 AATCCCCTTGCTGACCGGACATCCTTCGTACGTAGAGTATGGGCCT---TCTTTCTCGGC 247 Query 138777 CAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAG 138836 | ||| |||||| || | || || || || || ||||| ||||| ||||| Sbjct 248 GAGTTCGCAGCTCGCTTCCAAAGCGCCGTAATAGATTGTTTCAAAGATCTGGACGTTGAG 307 Query 138837 CAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCC 138896 | || || |||||||| |||| || | || |||| || || || || Sbjct 308 TTTCTGAGCTTCTTCGCTCTCGAACGGATAACGCATCAGGATGAAGAGATCCGCGAGACC 367 Query 138897 TTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGG 138956 || | ||| | |||| || ||||| |||| || || | || || | || || Sbjct 368 CTGGATGCCGATACCGATGGGTCGATGACGCATGTTCGAGGTCTTCGCCTCGGGAATCGG 427 Query 138957 ATAATAGTTTACATCGATGATTTTGTT 138983 || |||| || ||||||||||| || Sbjct 428 GTAGAAGTTGACGTCGATGATTTTATT 454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443046373764440